BLASTX nr result

ID: Coptis25_contig00038258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038258
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]     161   5e-38
ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinif...   160   1e-37
ref|XP_002528102.1| conserved hypothetical protein [Ricinus comm...   158   5e-37
ref|XP_003623296.1| hypothetical protein MTR_7g068310 [Medicago ...   157   7e-37
ref|XP_002309136.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]
          Length = 480

 Score =  161 bits (408), Expect = 5e-38
 Identities = 77/119 (64%), Positives = 96/119 (80%), Gaps = 2/119 (1%)
 Frame = -1

Query: 352 QGEKHVVLVEKYSNGTAKRYILDGDSPIQSFF--EESSVNGSQEASNSSKEELFWLPDNV 179
           Q    V+LVE+YSNGTAKRY+L  DS +Q+F   E+ S     +  +SS E L WLP+ +
Sbjct: 35  QVSSRVILVERYSNGTAKRYVLGDDSQLQAFLVEEDRSTPNRFQDLHSSDESLSWLPEII 94

Query: 178 KEFILPAGFPGSVSDDYLEYMVLQFPTNITAWVCHTLVTSSLLKAVGVGSFSGSTAAAS 2
           K+F+LPAGFPGSVSDDYL+YM+LQFPTN+T W+CHTLVTSSLLKAVG+GSF+G+TAAAS
Sbjct: 95  KDFVLPAGFPGSVSDDYLDYMLLQFPTNVTGWICHTLVTSSLLKAVGIGSFTGTTAAAS 153


>ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinifera]
          Length = 503

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/119 (68%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = -1

Query: 352 QGEKHVVLVEKYSNGTAK-RYILDGDSPIQSFFEESSVNGSQ-EASNSSKEELFWLPDNV 179
           Q  +HV+L+EKY+NGTAK R+ILD D  IQ+F EE      + + S+ S  +L WLP  V
Sbjct: 55  QCPQHVILLEKYNNGTAKSRFILDDDIQIQTFLEEEGSKTERVQGSSFSDTQLSWLPIIV 114

Query: 178 KEFILPAGFPGSVSDDYLEYMVLQFPTNITAWVCHTLVTSSLLKAVGVGSFSGSTAAAS 2
           K+FILPAGFPGSVSDDYLEYM+LQFPTN+TAW+CHTLVTSSLLKAVGVGSFS +TAAAS
Sbjct: 115 KDFILPAGFPGSVSDDYLEYMLLQFPTNVTAWICHTLVTSSLLKAVGVGSFSATTAAAS 173


>ref|XP_002528102.1| conserved hypothetical protein [Ricinus communis]
           gi|223532491|gb|EEF34281.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 485

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/115 (64%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
 Frame = -1

Query: 343 KHVVLVEKYSNGTAKRYILDGDSPIQSFFEESSV-NGSQEASNSSKEELFWLPDNVKEFI 167
           ++V+LVE+Y+NGT++RY+LD D+ ++ F EE    N + + S SS   L WLP  +K+FI
Sbjct: 43  RNVILVERYANGTSRRYVLDDDAQLKPFLEEQGAKNSALQESYSSDINLSWLPYIIKDFI 102

Query: 166 LPAGFPGSVSDDYLEYMVLQFPTNITAWVCHTLVTSSLLKAVGVGSFSGSTAAAS 2
           LPAGFPGSVSDDY +YM+LQFPTN+T W+CHTLVTSSLLKAVGVGSF+GSTAAA+
Sbjct: 103 LPAGFPGSVSDDYFQYMLLQFPTNVTGWICHTLVTSSLLKAVGVGSFTGSTAAAA 157


>ref|XP_003623296.1| hypothetical protein MTR_7g068310 [Medicago truncatula]
           gi|355498311|gb|AES79514.1| hypothetical protein
           MTR_7g068310 [Medicago truncatula]
          Length = 492

 Score =  157 bits (398), Expect = 7e-37
 Identities = 77/119 (64%), Positives = 93/119 (78%), Gaps = 2/119 (1%)
 Frame = -1

Query: 352 QGEKHVVLVEKYSNGTAKRYILDGDSPIQSFF--EESSVNGSQEASNSSKEELFWLPDNV 179
           +G   V+LVE+YSNGTAKRYI+  DS +++    E+ S        +S  + L WLPD V
Sbjct: 48  EGLSRVILVERYSNGTAKRYIIGDDSRLRTILIEEDRSTQNRFGVLHSPDKRLSWLPDTV 107

Query: 178 KEFILPAGFPGSVSDDYLEYMVLQFPTNITAWVCHTLVTSSLLKAVGVGSFSGSTAAAS 2
           K FILPAGFPGSVSDDYL+YM+LQFPTN+T W+CHT+VTSSLLKAVGVGSFSG+TAAAS
Sbjct: 108 KAFILPAGFPGSVSDDYLQYMLLQFPTNVTGWICHTIVTSSLLKAVGVGSFSGTTAAAS 166


>ref|XP_002309136.1| predicted protein [Populus trichocarpa] gi|222855112|gb|EEE92659.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  156 bits (395), Expect = 1e-36
 Identities = 78/116 (67%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = -1

Query: 346 EKHVVLVEKYSNGTAKRYILDGDSPIQSFFEES-SVNGSQEASNSSKEELFWLPDNVKEF 170
           +  V+L+E+Y NGTAKRY LD    +Q F E++ S N S E S  S+  L WLPD +K+F
Sbjct: 46  DNEVILLERYGNGTAKRYTLDDAVQLQGFLEKNGSENRSFEESRLSEAGLSWLPDILKDF 105

Query: 169 ILPAGFPGSVSDDYLEYMVLQFPTNITAWVCHTLVTSSLLKAVGVGSFSGSTAAAS 2
           ILPAGFPGSVSDDYL+YMVLQFPTNIT W+CHTLVTSSLLKAVG GSF+G+ AAAS
Sbjct: 106 ILPAGFPGSVSDDYLQYMVLQFPTNITGWICHTLVTSSLLKAVGAGSFTGTDAAAS 161


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