BLASTX nr result

ID: Coptis25_contig00038219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038219
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34918.3| unnamed protein product [Vitis vinifera]              153   1e-35
dbj|BAH80548.1| transcription factor Myb [Eucalyptus grandis]         152   3e-35
ref|XP_002318045.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002279128.2| PREDICTED: transcription factor WER-like [Vi...   152   4e-35
emb|CAN70191.1| hypothetical protein VITISV_016818 [Vitis vinifera]   152   4e-35

>emb|CBI34918.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/116 (68%), Positives = 87/116 (75%)
 Frame = +3

Query: 6   TGLKRCGKSCRLRWINYLSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDNQ 185
           TGL+RCGKSCRLRWINYLSPNVK+GDFT EEEDLI RLHKLLGNRWSLIAGRVPGRTDNQ
Sbjct: 39  TGLRRCGKSCRLRWINYLSPNVKRGDFTAEEEDLIIRLHKLLGNRWSLIAGRVPGRTDNQ 98

Query: 186 VKNHWNTHLSKKQLGVNKRKRKVGKPSSSRLPGDDDNRKEKDSNFMVSGHDSNGGS 353
           VKN+WNTHLSKK LG+ K+    G   SS L    + +K  +     S   S G S
Sbjct: 99  VKNYWNTHLSKK-LGIKKKNN--GANVSSTLTNTREMQKGSEPLMNSSSSPSCGSS 151


>dbj|BAH80548.1| transcription factor Myb [Eucalyptus grandis]
          Length = 221

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/116 (67%), Positives = 89/116 (76%), Gaps = 6/116 (5%)
 Frame = +3

Query: 3   MTGLKRCGKSCRLRWINYLSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDN 182
           MTGLKRCGKSCRLRW+NYLSP+VK+GDF+EEE+DLI RLH LLGNRWSLIAGRVPGRTDN
Sbjct: 39  MTGLKRCGKSCRLRWMNYLSPSVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDN 98

Query: 183 QVKNHWNTHLSKKQLGVNKRKRKVGKPSSSRLPGDDDNR------KEKDSNFMVSG 332
           QVKNHWNTHLSK+ LG  K K +            DD+R      KEK+++ MV G
Sbjct: 99  QVKNHWNTHLSKR-LGFKKGKGRA-----------DDHRPRTHLKKEKENHAMVLG 142


>ref|XP_002318045.1| predicted protein [Populus trichocarpa] gi|222858718|gb|EEE96265.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/89 (79%), Positives = 81/89 (91%)
 Frame = +3

Query: 3   MTGLKRCGKSCRLRWINYLSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDN 182
           +TGLKRCGKSCRLRW+NYLSP+VK+G F+EEE+DLI RLHKLLGNRWSLIAGRVPGRTDN
Sbjct: 40  VTGLKRCGKSCRLRWMNYLSPSVKRGVFSEEEDDLIIRLHKLLGNRWSLIAGRVPGRTDN 99

Query: 183 QVKNHWNTHLSKKQLGVNKRKRKVGKPSS 269
           QVKNHWNTHLSK+ LG+ ++K KV   SS
Sbjct: 100 QVKNHWNTHLSKR-LGIKQKKCKVSASSS 127


>ref|XP_002279128.2| PREDICTED: transcription factor WER-like [Vitis vinifera]
           gi|297733776|emb|CBI15023.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/113 (66%), Positives = 90/113 (79%)
 Frame = +3

Query: 3   MTGLKRCGKSCRLRWINYLSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDN 182
           +TGLKRCGKSCRLRW+NYLSP+VK+GDF++EE+DLI RLH LLGNRWSLIAGRVPGRTDN
Sbjct: 38  VTGLKRCGKSCRLRWMNYLSPSVKRGDFSQEEDDLIIRLHNLLGNRWSLIAGRVPGRTDN 97

Query: 183 QVKNHWNTHLSKKQLGVNKRKRKVGKPSSSRLPGDDDNRKEKDSNFMVSGHDS 341
           QVKNHWNTHLSKK LG+ K K K    S ++      + + K+++ M S  DS
Sbjct: 98  QVKNHWNTHLSKK-LGIKKHKSKSEGSSQAQ------SIEAKEAHSMPSNPDS 143


>emb|CAN70191.1| hypothetical protein VITISV_016818 [Vitis vinifera]
          Length = 216

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/113 (66%), Positives = 90/113 (79%)
 Frame = +3

Query: 3   MTGLKRCGKSCRLRWINYLSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDN 182
           +TGLKRCGKSCRLRW+NYLSP+VK+GDF++EE+DLI RLH LLGNRWSLIAGRVPGRTDN
Sbjct: 38  VTGLKRCGKSCRLRWMNYLSPSVKRGDFSQEEDDLIIRLHNLLGNRWSLIAGRVPGRTDN 97

Query: 183 QVKNHWNTHLSKKQLGVNKRKRKVGKPSSSRLPGDDDNRKEKDSNFMVSGHDS 341
           QVKNHWNTHLSKK LG+ K K K    S ++      + + K+++ M S  DS
Sbjct: 98  QVKNHWNTHLSKK-LGIKKHKSKSEGSSQAQ------SIEAKEAHSMPSNPDS 143


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