BLASTX nr result
ID: Coptis25_contig00038215
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038215 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI25615.3| unnamed protein product [Vitis vinifera] 177 8e-43 ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l... 177 8e-43 ref|XP_002523525.1| protein with unknown function [Ricinus commu... 176 1e-42 ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2... 172 2e-41 ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-l... 171 8e-41 >emb|CBI25615.3| unnamed protein product [Vitis vinifera] Length = 450 Score = 177 bits (449), Expect = 8e-43 Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 2/125 (1%) Frame = -3 Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190 SS+D +ACIWDLR D+ +PK LK V H RAVHSAYFSP+GS LATTS+++ VG+L G + Sbjct: 300 SSSDATACIWDLRKIDSDKPKTLKTVSHARAVHSAYFSPSGSSLATTSVENKVGLLGGVN 359 Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIST--DRDITTLQSSDMS 16 F + SM++H NH RWISSFRAIWGWDDSYLF+GNMKR VD+IST + + TLQS+ MS Sbjct: 360 FEDLSMIYHENHMCRWISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMS 419 Query: 15 AIPCR 1 AIPCR Sbjct: 420 AIPCR 424 >ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera] Length = 489 Score = 177 bits (449), Expect = 8e-43 Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 2/125 (1%) Frame = -3 Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190 SS+D +ACIWDLR D+ +PK LK V H RAVHSAYFSP+GS LATTS+++ VG+L G + Sbjct: 339 SSSDATACIWDLRKIDSDKPKTLKTVSHARAVHSAYFSPSGSSLATTSVENKVGLLGGVN 398 Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIST--DRDITTLQSSDMS 16 F + SM++H NH RWISSFRAIWGWDDSYLF+GNMKR VD+IST + + TLQS+ MS Sbjct: 399 FEDLSMIYHENHMCRWISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMS 458 Query: 15 AIPCR 1 AIPCR Sbjct: 459 AIPCR 463 >ref|XP_002523525.1| protein with unknown function [Ricinus communis] gi|223537232|gb|EEF38864.1| protein with unknown function [Ricinus communis] Length = 530 Score = 176 bits (447), Expect = 1e-42 Identities = 86/125 (68%), Positives = 98/125 (78%), Gaps = 2/125 (1%) Frame = -3 Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190 SSTDG+AC+WD+R +PK LKIV H RAVHSAYFSP+GS LATTS D+ VG+LS AD Sbjct: 380 SSTDGTACLWDIRSVSPAKPKSLKIVSHNRAVHSAYFSPSGSYLATTSPDNTVGVLSTAD 439 Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVISTD--RDITTLQSSDMS 16 F +T + H N TGRWISSFRAIWGWDDSY+F+GNMKR VD+IS R I TLQS MS Sbjct: 440 FEDTCRIDHYNQTGRWISSFRAIWGWDDSYIFIGNMKRGVDIISRPQRRAILTLQSPHMS 499 Query: 15 AIPCR 1 AIPCR Sbjct: 500 AIPCR 504 >ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1| predicted protein [Populus trichocarpa] Length = 513 Score = 172 bits (437), Expect = 2e-41 Identities = 84/125 (67%), Positives = 99/125 (79%), Gaps = 2/125 (1%) Frame = -3 Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190 SS+D + C+WDLR DA +PK LKIV+H+RAVHSAYFSP+GS LA+TS DD VGILSG + Sbjct: 363 SSSDATVCLWDLRKVDAGKPKSLKIVNHERAVHSAYFSPSGSSLASTSFDDTVGILSGVN 422 Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIS--TDRDITTLQSSDMS 16 F + S V H N TGRWISSFRA WGWDDS+++VGNMKR VD+IS R I TLQS M+ Sbjct: 423 FEDASRVHHCNQTGRWISSFRATWGWDDSFVYVGNMKRGVDIISPAQRRVIRTLQSPHMT 482 Query: 15 AIPCR 1 AIPCR Sbjct: 483 AIPCR 487 >ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus] Length = 521 Score = 171 bits (432), Expect = 8e-41 Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 2/125 (1%) Frame = -3 Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190 SS+DG+ACIWDLR +P+ LK + HK+A+HSAYFSP+G LATTS DD VGI G + Sbjct: 368 SSSDGTACIWDLRSVSDEKPQTLKTITHKKAIHSAYFSPSGRFLATTSFDDTVGIYGGVN 427 Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIST--DRDITTLQSSDMS 16 F +TS++ H+N TGRWISSFRAIWGWDDSY+F+GNMKRAVDVIS + + LQS +S Sbjct: 428 FKDTSLIPHDNQTGRWISSFRAIWGWDDSYIFIGNMKRAVDVISRAYRKRVFVLQSPKIS 487 Query: 15 AIPCR 1 AIPCR Sbjct: 488 AIPCR 492