BLASTX nr result

ID: Coptis25_contig00038215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038215
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25615.3| unnamed protein product [Vitis vinifera]              177   8e-43
ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l...   177   8e-43
ref|XP_002523525.1| protein with unknown function [Ricinus commu...   176   1e-42
ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-l...   171   8e-41

>emb|CBI25615.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  177 bits (449), Expect = 8e-43
 Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -3

Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190
           SS+D +ACIWDLR  D+ +PK LK V H RAVHSAYFSP+GS LATTS+++ VG+L G +
Sbjct: 300 SSSDATACIWDLRKIDSDKPKTLKTVSHARAVHSAYFSPSGSSLATTSVENKVGLLGGVN 359

Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIST--DRDITTLQSSDMS 16
           F + SM++H NH  RWISSFRAIWGWDDSYLF+GNMKR VD+IST   + + TLQS+ MS
Sbjct: 360 FEDLSMIYHENHMCRWISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMS 419

Query: 15  AIPCR 1
           AIPCR
Sbjct: 420 AIPCR 424


>ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera]
          Length = 489

 Score =  177 bits (449), Expect = 8e-43
 Identities = 83/125 (66%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -3

Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190
           SS+D +ACIWDLR  D+ +PK LK V H RAVHSAYFSP+GS LATTS+++ VG+L G +
Sbjct: 339 SSSDATACIWDLRKIDSDKPKTLKTVSHARAVHSAYFSPSGSSLATTSVENKVGLLGGVN 398

Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIST--DRDITTLQSSDMS 16
           F + SM++H NH  RWISSFRAIWGWDDSYLF+GNMKR VD+IST   + + TLQS+ MS
Sbjct: 399 FEDLSMIYHENHMCRWISSFRAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMS 458

Query: 15  AIPCR 1
           AIPCR
Sbjct: 459 AIPCR 463


>ref|XP_002523525.1| protein with unknown function [Ricinus communis]
           gi|223537232|gb|EEF38864.1| protein with unknown
           function [Ricinus communis]
          Length = 530

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/125 (68%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
 Frame = -3

Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190
           SSTDG+AC+WD+R     +PK LKIV H RAVHSAYFSP+GS LATTS D+ VG+LS AD
Sbjct: 380 SSTDGTACLWDIRSVSPAKPKSLKIVSHNRAVHSAYFSPSGSYLATTSPDNTVGVLSTAD 439

Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVISTD--RDITTLQSSDMS 16
           F +T  + H N TGRWISSFRAIWGWDDSY+F+GNMKR VD+IS    R I TLQS  MS
Sbjct: 440 FEDTCRIDHYNQTGRWISSFRAIWGWDDSYIFIGNMKRGVDIISRPQRRAILTLQSPHMS 499

Query: 15  AIPCR 1
           AIPCR
Sbjct: 500 AIPCR 504


>ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  172 bits (437), Expect = 2e-41
 Identities = 84/125 (67%), Positives = 99/125 (79%), Gaps = 2/125 (1%)
 Frame = -3

Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190
           SS+D + C+WDLR  DA +PK LKIV+H+RAVHSAYFSP+GS LA+TS DD VGILSG +
Sbjct: 363 SSSDATVCLWDLRKVDAGKPKSLKIVNHERAVHSAYFSPSGSSLASTSFDDTVGILSGVN 422

Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIS--TDRDITTLQSSDMS 16
           F + S V H N TGRWISSFRA WGWDDS+++VGNMKR VD+IS    R I TLQS  M+
Sbjct: 423 FEDASRVHHCNQTGRWISSFRATWGWDDSFVYVGNMKRGVDIISPAQRRVIRTLQSPHMT 482

Query: 15  AIPCR 1
           AIPCR
Sbjct: 483 AIPCR 487


>ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus]
          Length = 521

 Score =  171 bits (432), Expect = 8e-41
 Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
 Frame = -3

Query: 369 SSTDGSACIWDLRHTDARRPKYLKIVDHKRAVHSAYFSPTGSCLATTSLDDHVGILSGAD 190
           SS+DG+ACIWDLR     +P+ LK + HK+A+HSAYFSP+G  LATTS DD VGI  G +
Sbjct: 368 SSSDGTACIWDLRSVSDEKPQTLKTITHKKAIHSAYFSPSGRFLATTSFDDTVGIYGGVN 427

Query: 189 FMNTSMVFHNNHTGRWISSFRAIWGWDDSYLFVGNMKRAVDVIST--DRDITTLQSSDMS 16
           F +TS++ H+N TGRWISSFRAIWGWDDSY+F+GNMKRAVDVIS    + +  LQS  +S
Sbjct: 428 FKDTSLIPHDNQTGRWISSFRAIWGWDDSYIFIGNMKRAVDVISRAYRKRVFVLQSPKIS 487

Query: 15  AIPCR 1
           AIPCR
Sbjct: 488 AIPCR 492


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