BLASTX nr result

ID: Coptis25_contig00038209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038209
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328955.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002328955.1| predicted protein [Populus trichocarpa] gi|222839189|gb|EEE77540.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/93 (37%), Positives = 49/93 (52%)
 Frame = +1

Query: 157 ARPLNQFHQNNFMATDPGLNIAYQQQEQENIAVSSTEQTSNLVFPCDLQSARDQVSQPEK 336
           ARPL      +  AT+  L +        N A+   E+ S  V PC ++       +  +
Sbjct: 29  ARPLYTTLLQSLTATESALPMENMDDVYVNPAM---EKDSKHVLPCHMEIGEGSNIRSTR 85

Query: 337 RYGKYGSSMVLNILRKGTVPPSGPSKGSNSVMD 435
             GK+G  M+LN+L KGT+PPSGPSKG NS+ D
Sbjct: 86  LAGKFGP-MILNVLPKGTIPPSGPSKGGNSLND 117


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