BLASTX nr result
ID: Coptis25_contig00038202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038202 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002445906.1| hypothetical protein SORBIDRAFT_07g027820 [S... 63 3e-08 ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [S... 62 4e-08 gb|ABA98502.1| transposon protein, putative, Mutator sub-class [... 60 2e-07 gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japo... 60 2e-07 ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago ... 59 3e-07 >ref|XP_002445906.1| hypothetical protein SORBIDRAFT_07g027820 [Sorghum bicolor] gi|241942256|gb|EES15401.1| hypothetical protein SORBIDRAFT_07g027820 [Sorghum bicolor] Length = 846 Score = 62.8 bits (151), Expect = 3e-08 Identities = 29/63 (46%), Positives = 42/63 (66%) Frame = +2 Query: 17 LPPKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAEPIAP 196 LPP+ ++MPGRP+ RRM+ E+ +S SR G +I+CGRC+ GHN K+CT E + Sbjct: 783 LPPRVKKMPGRPQTKRRMDP-SERVNSSTKSSRVGVKIQCGRCKGTGHNAKSCTVELVFT 841 Query: 197 NRN 205 + N Sbjct: 842 HVN 844 >ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor] gi|241915111|gb|EER88255.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor] Length = 981 Score = 62.4 bits (150), Expect = 4e-08 Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 20/138 (14%) Frame = +2 Query: 17 LPPKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAEPIAP 196 LPP +MPGRPK RR E EE + T +S+ GT++ C C HN + C P A Sbjct: 808 LPPAFVKMPGRPKTQRRREQGEEPKGTK--LSKVGTKMTCRLCGKQDHNSRRCPKNPEAA 865 Query: 197 N---------RNEKRR----------NYAKPSKTGGNQQSRKGILRGRKLKALAEEPSNT 319 N +N+KR+ AK K G Q R +GR +A A +P+ + Sbjct: 866 NKHNAHIKRDKNKKRKMAETSGAASSGKAKKPKVAGRQAPR----QGRARQASASQPTGS 921 Query: 320 TP-AEPDNALLPIDNAPP 370 P A +A P PP Sbjct: 922 QPGATQSSASQPTFRQPP 939 >gb|ABA98502.1| transposon protein, putative, Mutator sub-class [Oryza sativa Japonica Group] Length = 760 Score = 59.7 bits (143), Expect = 2e-07 Identities = 29/54 (53%), Positives = 35/54 (64%) Frame = +2 Query: 23 PKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAE 184 P +MPGRPKK RR E HE+ + T VS+ GT IRC RC+ +GHNK C E Sbjct: 686 PPYVKMPGRPKKERRREPHEKPKATR--VSKVGTIIRCRRCKGIGHNKTTCARE 737 >gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japonica Group] Length = 783 Score = 59.7 bits (143), Expect = 2e-07 Identities = 29/54 (53%), Positives = 35/54 (64%) Frame = +2 Query: 23 PKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAE 184 P +MPGRPKK RR E HE+ + T VS+ GT IRC RC+ +GHNK C E Sbjct: 709 PPYVKMPGRPKKERRREPHEKPKATR--VSKVGTIIRCRRCKGIGHNKTTCARE 760 >ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago truncatula] gi|355488998|gb|AES70201.1| hypothetical protein MTR_3g049490 [Medicago truncatula] Length = 228 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Frame = +2 Query: 14 ILPPKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAEPIA 193 ILPP ARR PGRPKK RR E ++E + S R +RC RC+ LGHN + C + A Sbjct: 59 ILPPGARRAPGRPKKARRKE-NDEPKTASKKGKRNQVTLRCRRCKELGHNTRTCGGKTGA 117 Query: 194 PNR----NEKRRNYAKPSKTGGNQQS 259 R K N N QS Sbjct: 118 DRRIPVGGNKHNNNESAQANTSNVQS 143