BLASTX nr result

ID: Coptis25_contig00038202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038202
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445906.1| hypothetical protein SORBIDRAFT_07g027820 [S...    63   3e-08
ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [S...    62   4e-08
gb|ABA98502.1| transposon protein, putative, Mutator sub-class [...    60   2e-07
gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japo...    60   2e-07
ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago ...    59   3e-07

>ref|XP_002445906.1| hypothetical protein SORBIDRAFT_07g027820 [Sorghum bicolor]
           gi|241942256|gb|EES15401.1| hypothetical protein
           SORBIDRAFT_07g027820 [Sorghum bicolor]
          Length = 846

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +2

Query: 17  LPPKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAEPIAP 196
           LPP+ ++MPGRP+  RRM+   E+  +S   SR G +I+CGRC+  GHN K+CT E +  
Sbjct: 783 LPPRVKKMPGRPQTKRRMDP-SERVNSSTKSSRVGVKIQCGRCKGTGHNAKSCTVELVFT 841

Query: 197 NRN 205
           + N
Sbjct: 842 HVN 844


>ref|XP_002436888.1| hypothetical protein SORBIDRAFT_10g010620 [Sorghum bicolor]
            gi|241915111|gb|EER88255.1| hypothetical protein
            SORBIDRAFT_10g010620 [Sorghum bicolor]
          Length = 981

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 20/138 (14%)
 Frame = +2

Query: 17   LPPKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAEPIAP 196
            LPP   +MPGRPK  RR E  EE + T   +S+ GT++ C  C    HN + C   P A 
Sbjct: 808  LPPAFVKMPGRPKTQRRREQGEEPKGTK--LSKVGTKMTCRLCGKQDHNSRRCPKNPEAA 865

Query: 197  N---------RNEKRR----------NYAKPSKTGGNQQSRKGILRGRKLKALAEEPSNT 319
            N         +N+KR+            AK  K  G Q  R    +GR  +A A +P+ +
Sbjct: 866  NKHNAHIKRDKNKKRKMAETSGAASSGKAKKPKVAGRQAPR----QGRARQASASQPTGS 921

Query: 320  TP-AEPDNALLPIDNAPP 370
             P A   +A  P    PP
Sbjct: 922  QPGATQSSASQPTFRQPP 939


>gb|ABA98502.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 760

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/54 (53%), Positives = 35/54 (64%)
 Frame = +2

Query: 23  PKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAE 184
           P   +MPGRPKK RR E HE+ + T   VS+ GT IRC RC+ +GHNK  C  E
Sbjct: 686 PPYVKMPGRPKKERRREPHEKPKATR--VSKVGTIIRCRRCKGIGHNKTTCARE 737


>gb|EEE53212.1| hypothetical protein OsJ_36100 [Oryza sativa Japonica Group]
          Length = 783

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/54 (53%), Positives = 35/54 (64%)
 Frame = +2

Query: 23  PKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAE 184
           P   +MPGRPKK RR E HE+ + T   VS+ GT IRC RC+ +GHNK  C  E
Sbjct: 709 PPYVKMPGRPKKERRREPHEKPKATR--VSKVGTIIRCRRCKGIGHNKTTCARE 760


>ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago truncatula]
           gi|355488998|gb|AES70201.1| hypothetical protein
           MTR_3g049490 [Medicago truncatula]
          Length = 228

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +2

Query: 14  ILPPKARRMPGRPKKNRRMEMHEEKRKTSHMVSRKGTQIRCGRCQVLGHNKKNCTAEPIA 193
           ILPP ARR PGRPKK RR E ++E +  S    R    +RC RC+ LGHN + C  +  A
Sbjct: 59  ILPPGARRAPGRPKKARRKE-NDEPKTASKKGKRNQVTLRCRRCKELGHNTRTCGGKTGA 117

Query: 194 PNR----NEKRRNYAKPSKTGGNQQS 259
             R      K  N         N QS
Sbjct: 118 DRRIPVGGNKHNNNESAQANTSNVQS 143


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