BLASTX nr result

ID: Coptis25_contig00038162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038162
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza...    85   5e-15
gb|ABA95236.1| AT hook motif-containing protein, putative, expre...    85   5e-15
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]         85   5e-15
gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]           85   5e-15
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    84   9e-15

>gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 1618

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/86 (47%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   LDPNIIAGLIEMLNENNIIAESYRMARDRFTESEIADVSIRLISTRQTDGRVYNMPTSNE 181
           +D +I+ GL  ML+  N++A+++RMARDRF E +  +VS+RLI  R  DGR +NMP+++E
Sbjct: 435 IDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASE 494

Query: 182 VAGLIVGNGDESQGHRDVVVDKKGYG 259
           VA LIV +  E+Q  RD++V  K  G
Sbjct: 495 VAALIVNDTSENQKGRDIIVHYKDTG 520


>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1682

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/86 (47%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   LDPNIIAGLIEMLNENNIIAESYRMARDRFTESEIADVSIRLISTRQTDGRVYNMPTSNE 181
           +D +I+ GL  ML+  N++A+++RMARDRF E +  +VS+RLI  R  DGR +NMP+++E
Sbjct: 435 IDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASE 494

Query: 182 VAGLIVGNGDESQGHRDVVVDKKGYG 259
           VA LIV +  E+Q  RD++V  K  G
Sbjct: 495 VAALIVNDTSENQKGRDIIVHYKDTG 520


>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1634

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/86 (47%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   LDPNIIAGLIEMLNENNIIAESYRMARDRFTESEIADVSIRLISTRQTDGRVYNMPTSNE 181
           +D +I+ GL  ML+  N++A+++RMARDRF E +  +VS+RLI  R  DGR +NMP+++E
Sbjct: 387 IDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASE 446

Query: 182 VAGLIVGNGDESQGHRDVVVDKKGYG 259
           VA LIV +  E+Q  RD++V  K  G
Sbjct: 447 VAALIVNDTSENQKGRDIIVHYKDTG 472


>gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]
          Length = 1525

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/86 (47%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   LDPNIIAGLIEMLNENNIIAESYRMARDRFTESEIADVSIRLISTRQTDGRVYNMPTSNE 181
           +D +I+ GL  ML+  N++A+++RMARDRF E +  +VS+RLI  R  DGR +NMP+++E
Sbjct: 278 IDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMPSASE 337

Query: 182 VAGLIVGNGDESQGHRDVVVDKKGYG 259
           VA LIV +  E+Q  RD++V  K  G
Sbjct: 338 VAALIVNDTSENQKGRDIIVHYKDTG 363


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/86 (48%), Positives = 58/86 (67%)
 Frame = +2

Query: 2   LDPNIIAGLIEMLNENNIIAESYRMARDRFTESEIADVSIRLISTRQTDGRVYNMPTSNE 181
           LD +I+  L +ML+ NN +A+ +RMARDR +  +  +V IRLI TR  D R Y  PT+ E
Sbjct: 154 LDADIVRRLKDMLDMNNSVAKLFRMARDRLSAPDNKEVRIRLIGTRSNDSRQYTAPTATE 213

Query: 182 VAGLIVGNGDESQGHRDVVVDKKGYG 259
           +AGLIVG+  ES G RD+V++ K  G
Sbjct: 214 IAGLIVGDFGESNGRRDIVIEHKTDG 239


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