BLASTX nr result

ID: Coptis25_contig00038155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038155
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543360.1| PREDICTED: uncharacterized protein LOC100795...    94   9e-18
ref|XP_002525772.1| conserved hypothetical protein [Ricinus comm...    93   3e-17
ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263...    89   4e-16
ref|XP_002525775.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002525771.1| conserved hypothetical protein [Ricinus comm...    89   4e-16

>ref|XP_003543360.1| PREDICTED: uncharacterized protein LOC100795182 [Glycine max]
          Length = 90

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/88 (54%), Positives = 64/88 (72%)
 Frame = -3

Query: 266 MSLTSRACVVAVSLGVMQTFKDQGLYRWNYAFRSLQQQTKSNIRSFYEANRFTPSSSLVV 87
           MS + RA  VA+S+GV++T KDQGL RWN AF+S QQ  KS++RS  +A + + SSS ++
Sbjct: 2   MSSSRRAWTVAISVGVVETLKDQGLCRWNSAFKSAQQSVKSHLRSLSQAKKLSSSSSAML 61

Query: 86  SKQLKNGDGIKQSQDEESLRKVMYLSCW 3
           S  L++G+  K S  EESLR VMYLSCW
Sbjct: 62  SSTLQHGEKAKHS--EESLRTVMYLSCW 87


>ref|XP_002525772.1| conserved hypothetical protein [Ricinus communis]
           gi|255569615|ref|XP_002525773.1| conserved hypothetical
           protein [Ricinus communis] gi|223534922|gb|EEF36608.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223534923|gb|EEF36609.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 MSLTSRACVVAVSLGVMQTFKDQGLYRWNYAFRSLQQQTKSNIRSFYEAN--RFTPSSSL 93
           MS TSRA +VA S+GV++  KDQGL RWNYA RS+QQ  K+NIR  Y  +    +P SS 
Sbjct: 1   MSSTSRAWMVAASIGVVEALKDQGLCRWNYALRSIQQHAKNNIRRSYSQHPKMLSPLSSS 60

Query: 92  VVSKQLKNGDGIKQSQDEESLRKVMYLSCW 3
            VSK LK+    K  + EESLR VMYLSCW
Sbjct: 61  AVSKNLKDE---KLKRSEESLRTVMYLSCW 87


>ref|XP_002275321.1| PREDICTED: uncharacterized protein LOC100263064 [Vitis vinifera]
          Length = 88

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/88 (50%), Positives = 59/88 (67%)
 Frame = -3

Query: 266 MSLTSRACVVAVSLGVMQTFKDQGLYRWNYAFRSLQQQTKSNIRSFYEANRFTPSSSLVV 87
           MS   +A VVA S+G ++  KDQG  RWNY  RS+ Q  K+N+RSF +A + + SSS +V
Sbjct: 1   MSHMRKAWVVAASVGAVEALKDQGFCRWNYTLRSIHQHAKNNLRSFSQARKLSSSSSAMV 60

Query: 86  SKQLKNGDGIKQSQDEESLRKVMYLSCW 3
           S ++++    K  Q EESLR VMYLSCW
Sbjct: 61  SSRMRDE---KAKQSEESLRTVMYLSCW 85


>ref|XP_002525775.1| conserved hypothetical protein [Ricinus communis]
           gi|223534925|gb|EEF36611.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 91

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
 Frame = -3

Query: 266 MSLTSRACVVAVSLGVMQTFKDQGLYRWNYAFRSLQQQTKSNIRSFYEAN---RFTPSSS 96
           MS TSRA +VA S+GV++  KDQGL RWNYAFRS+QQ  K+NIR  Y  +     + SSS
Sbjct: 1   MSSTSRAWMVAASIGVVEALKDQGLCRWNYAFRSIQQHAKNNIRRSYSQHPKMLSSLSSS 60

Query: 95  LVVSKQLKNGDGIKQSQDEESLRKVMYLSCW 3
             +SK+L++    K  + EESLR VMYLSCW
Sbjct: 61  ADLSKKLEDE---KLKKSEESLRTVMYLSCW 88


>ref|XP_002525771.1| conserved hypothetical protein [Ricinus communis]
           gi|223534921|gb|EEF36607.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 8/96 (8%)
 Frame = -3

Query: 266 MSLTSRACVVAVSLGVMQTFKDQGLYRWNYAFRSLQQQTKSNIRSFYEANR--------F 111
           MS TSRA +VA S+GV++  KDQGL RWNYA RS+QQ  K+NIRS+ +AN+         
Sbjct: 1   MSSTSRAWMVAASIGVVEALKDQGLCRWNYALRSIQQHAKTNIRSYSQANKKLSLPSSSS 60

Query: 110 TPSSSLVVSKQLKNGDGIKQSQDEESLRKVMYLSCW 3
           + SSS +++K+L N D I +S  EESLR VMYLS W
Sbjct: 61  SSSSSALLTKKLGN-DQITKS--EESLRTVMYLSSW 93


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