BLASTX nr result

ID: Coptis25_contig00038144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038144
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234125.1| ABA-induced MYB transcription factor [Solanu...   111   6e-23
emb|CAN66274.1| hypothetical protein VITISV_009676 [Vitis vinifera]   111   6e-23
ref|XP_004136147.1| PREDICTED: transcription factor MYB75-like [...   109   2e-22
gb|AAN28281.1| myb-like transcription factor 5, partial [Gossypi...   103   1e-20
gb|AAK57700.1|AF377318_1 recombinant myb-like transcription fact...   103   1e-20

>ref|NP_001234125.1| ABA-induced MYB transcription factor [Solanum lycopersicum]
           gi|223006854|gb|ACM69370.1| ABA-induced MYB
           transcription factor [Solanum lycopersicum]
          Length = 243

 Score =  111 bits (278), Expect = 6e-23
 Identities = 68/175 (38%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   RTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXXX 182
           RTDNEIKNYWRTRVQKHAKQL+CDVNS+QF+DT+RYLW+PRLVERI+             
Sbjct: 105 RTDNEIKNYWRTRVQKHAKQLKCDVNSRQFQDTLRYLWIPRLVERIEASKISNYNCINEA 164

Query: 183 XXXXXXXXXXXXXXXXPVLPAGRSAHIN---SSLITPENSSTAASSDVSDPKDYYTFQDX 353
                                    HIN   S+ +T ENS  A SS  S+       QD 
Sbjct: 165 QQSI------------------MRTHINNNFSTSVTLENSRVATSSKNSN-------QDY 199

Query: 354 XXXXXXSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMWFGSEDTMENSWNVEDLW 518
                   + Y D+            Q ++QQ+   +W  +ED   N  N+ED+W
Sbjct: 200 NQVNQSDQLWYEDY------------QAMDQQNNIELWMDNEDVFNNLCNIEDIW 242


>emb|CAN66274.1| hypothetical protein VITISV_009676 [Vitis vinifera]
          Length = 243

 Score =  111 bits (278), Expect = 6e-23
 Identities = 76/189 (40%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
 Frame = +3

Query: 3   RTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXXX 182
           RTDNEIKNYWRTRVQK AKQL+CDVNSKQF+DTMRY+WMPRLVERI+             
Sbjct: 92  RTDNEIKNYWRTRVQKQAKQLKCDVNSKQFRDTMRYVWMPRLVERIK------------- 138

Query: 183 XXXXXXXXXXXXXXXXPVLPAGRSAHINSSLI-------------TPENSSTAASSDVSD 323
                           P  PA    H++S ++              PE S T   S VSD
Sbjct: 139 ---------AAGGDSTPTAPATYGHHMSSQILDMPRNGEFGLGYSDPEGSETQV-SPVSD 188

Query: 324 PKDYYTFQDXXXXXXXSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMW-FGSEDTMENSW 500
             DYY F                         +Q + G+EQ    N W  G  D++EN  
Sbjct: 189 MTDYYDFSGGXCSD------------------SQQNGGLEQ---SNGWSLGGGDSLENLL 227

Query: 501 NVEDLWFLQ 527
           N ED+WFL+
Sbjct: 228 NDEDIWFLK 236


>ref|XP_004136147.1| PREDICTED: transcription factor MYB75-like [Cucumis sativus]
           gi|449525742|ref|XP_004169875.1| PREDICTED:
           transcription factor MYB75-like [Cucumis sativus]
          Length = 258

 Score =  109 bits (273), Expect = 2e-22
 Identities = 68/175 (38%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3   RTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXXX 182
           RTDNEIKNYWRTRVQK AKQL CDVNSKQF+D MRY+WMPRL+ERIQ             
Sbjct: 90  RTDNEIKNYWRTRVQKQAKQLNCDVNSKQFRDAMRYVWMPRLLERIQ------------A 137

Query: 183 XXXXXXXXXXXXXXXXPVLPAGRSAHINSSLITPENSSTAASSDVSDPKDYYTFQDXXXX 362
                           P L   +S+   SS + P  + T +SSD     D    Q     
Sbjct: 138 STDSTTTIVDVIQPPHPPLELTQSSPSGSSWVNPHVAPTTSSSD--SISDQVQLQVSPVS 195

Query: 363 XXXSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMWFGSEDTMENS-WNVEDLWFL 524
               + N  D  + + G       G + +   N W G  + +EN  WN ED+W L
Sbjct: 196 DMTENFNMVD-KSEEDGMMMLMEHGCDGEAMINEWIGGGEVLENGLWNEEDMWTL 249


>gb|AAN28281.1| myb-like transcription factor 5, partial [Gossypium hirsutum]
           gi|23476303|gb|AAN28282.1| myb-like transcription factor
           2, partial [Gossypium raimondii]
          Length = 287

 Score =  103 bits (258), Expect = 1e-20
 Identities = 73/186 (39%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
 Frame = +3

Query: 3   RTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQ-XXXXXXXXXXXX 179
           RTDNEIKNYWRTRVQK AKQL CDVNSKQFKD MRY+W+PRLVERI+             
Sbjct: 108 RTDNEIKNYWRTRVQKQAKQLNCDVNSKQFKDAMRYVWIPRLVERIRASSESPSSQPSTT 167

Query: 180 XXXXXXXXXXXXXXXXXPVLPAGRSAHINSSLITPENSSTAAS------SDVSDPKDYYT 341
                                A  S  ++ SL+ PE S T++       S VSD  D Y 
Sbjct: 168 TNTTYNDRISNISSSQMSYANASGSVQVDPSLL-PELSGTSSDSLDTQVSSVSDLTDCYN 226

Query: 342 FQDXXXXXXXSHMNYPDFHTNQSGYFNQGSQGIEQQHEQ--NMWF--GSEDTMENSWNVE 509
            Q        S+  +      + G    G     Q  E+  N W   G E +M+  WN E
Sbjct: 227 PQS------LSNYLHKGLGLEKEGAATWGRDEEFQATEEHSNGWLVGGGESSMDTVWNEE 280

Query: 510 DLWFLQ 527
           ++WFLQ
Sbjct: 281 NVWFLQ 286


>gb|AAK57700.1|AF377318_1 recombinant myb-like transcription factor Myb 5 [synthetic
           construct]
          Length = 293

 Score =  103 bits (258), Expect = 1e-20
 Identities = 73/186 (39%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
 Frame = +3

Query: 3   RTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQ-XXXXXXXXXXXX 179
           RTDNEIKNYWRTRVQK AKQL CDVNSKQFKD MRY+W+PRLVERI+             
Sbjct: 108 RTDNEIKNYWRTRVQKQAKQLNCDVNSKQFKDAMRYVWIPRLVERIRASSESPSSQPSTT 167

Query: 180 XXXXXXXXXXXXXXXXXPVLPAGRSAHINSSLITPENSSTAAS------SDVSDPKDYYT 341
                                A  S  ++ SL+ PE S T++       S VSD  D Y 
Sbjct: 168 TKTTYNDCISNISSSQMSYANASGSVQVDPSLL-PELSGTSSDSLDTQVSSVSDLTDCYN 226

Query: 342 FQDXXXXXXXSHMNYPDFHTNQSGYFNQGSQGIEQQHEQ--NMWF--GSEDTMENSWNVE 509
            Q        S+  +      + G    G     Q  E+  N W   G E +M+  WN E
Sbjct: 227 PQS------LSNYLHKGLGLEKEGAATWGRDEEFQATEEHSNGWLVGGGESSMDTVWNEE 280

Query: 510 DLWFLQ 527
           ++WFLQ
Sbjct: 281 NVWFLQ 286


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