BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038138
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26289.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ...   137   9e-31

>emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/103 (73%), Positives = 90/103 (87%)
 Frame = +2

Query: 2   SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181
           SAGKW DVARVR+ L+EKG  K PGSSS++VNG I+EFT+ DESHP+MTHIA ML+EM C
Sbjct: 511 SAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNC 570

Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLIST 310
           R  DAGH+P+LS+VLLDVDE EKE+ L+RHSEKLAIAFGLI+T
Sbjct: 571 RFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIAT 613


>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/103 (73%), Positives = 90/103 (87%)
 Frame = +2

Query: 2   SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181
           SAGKW DVARVR+ L+EKG  K PGSSS++VNG I+EFT+ DESHP+MTHIA ML+EM C
Sbjct: 679 SAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNC 738

Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLIST 310
           R  DAGH+P+LS+VLLDVDE EKE+ L+RHSEKLAIAFGLI+T
Sbjct: 739 RFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIAT 781


>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
            predicted protein [Populus trichocarpa]
          Length = 845

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/106 (70%), Positives = 90/106 (84%)
 Frame = +2

Query: 2    SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181
            SAG+W DVA+VR+ LKEKG HK PGSSSIE+NG I EFT  DESHP+MTHI  ML+E+CC
Sbjct: 688  SAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICC 747

Query: 182  RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHG 319
            RL+D G+VP+L++VLLDV+E EKE+ L+RHSEKLAIAF LIST  G
Sbjct: 748  RLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQG 793


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/106 (68%), Positives = 88/106 (83%)
 Frame = +2

Query: 2   SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181
           SAGKW DVARVR+Q+KEKG  K PGSSSIEV G I+EFT+ DESH + THI  MLEE+ C
Sbjct: 679 SAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINC 738

Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHG 319
           RL +AG+VP+ ++VLLDVDE EKEH L+RHSEKLA+A+GLI+T  G
Sbjct: 739 RLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQG 784


>ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512083|gb|AES93706.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/106 (62%), Positives = 84/106 (79%)
 Frame = +2

Query: 2   SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181
           SAGKW DVARVR+Q+KEKG+ K  GSSSIEV+G I EFT+ DESH +   I  ML+E+ C
Sbjct: 671 SAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINC 730

Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHG 319
           R+   G+VP+ ++VL+DVDE EKEH L+RHSEKLA+A+GLI+T  G
Sbjct: 731 RISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKG 776