BLASTX nr result
ID: Coptis25_contig00038138
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00038138 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26289.3| unnamed protein product [Vitis vinifera] 160 1e-37 ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37 ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2... 156 1e-36 ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34 ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ... 137 9e-31 >emb|CBI26289.3| unnamed protein product [Vitis vinifera] Length = 668 Score = 160 bits (404), Expect = 1e-37 Identities = 76/103 (73%), Positives = 90/103 (87%) Frame = +2 Query: 2 SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181 SAGKW DVARVR+ L+EKG K PGSSS++VNG I+EFT+ DESHP+MTHIA ML+EM C Sbjct: 511 SAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNC 570 Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLIST 310 R DAGH+P+LS+VLLDVDE EKE+ L+RHSEKLAIAFGLI+T Sbjct: 571 RFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIAT 613 >ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690 [Vitis vinifera] Length = 836 Score = 160 bits (404), Expect = 1e-37 Identities = 76/103 (73%), Positives = 90/103 (87%) Frame = +2 Query: 2 SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181 SAGKW DVARVR+ L+EKG K PGSSS++VNG I+EFT+ DESHP+MTHIA ML+EM C Sbjct: 679 SAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNC 738 Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLIST 310 R DAGH+P+LS+VLLDVDE EKE+ L+RHSEKLAIAFGLI+T Sbjct: 739 RFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIAT 781 >ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa] Length = 845 Score = 156 bits (395), Expect = 1e-36 Identities = 75/106 (70%), Positives = 90/106 (84%) Frame = +2 Query: 2 SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181 SAG+W DVA+VR+ LKEKG HK PGSSSIE+NG I EFT DESHP+MTHI ML+E+CC Sbjct: 688 SAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICC 747 Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHG 319 RL+D G+VP+L++VLLDV+E EKE+ L+RHSEKLAIAF LIST G Sbjct: 748 RLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQG 793 >ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like [Glycine max] Length = 836 Score = 150 bits (379), Expect = 1e-34 Identities = 73/106 (68%), Positives = 88/106 (83%) Frame = +2 Query: 2 SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181 SAGKW DVARVR+Q+KEKG K PGSSSIEV G I+EFT+ DESH + THI MLEE+ C Sbjct: 679 SAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINC 738 Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHG 319 RL +AG+VP+ ++VLLDVDE EKEH L+RHSEKLA+A+GLI+T G Sbjct: 739 RLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQG 784 >ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 828 Score = 137 bits (345), Expect = 9e-31 Identities = 66/106 (62%), Positives = 84/106 (79%) Frame = +2 Query: 2 SAGKWCDVARVRMQLKEKGWHKPPGSSSIEVNGTINEFTASDESHPQMTHIARMLEEMCC 181 SAGKW DVARVR+Q+KEKG+ K GSSSIEV+G I EFT+ DESH + I ML+E+ C Sbjct: 671 SAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINC 730 Query: 182 RLKDAGHVPNLSHVLLDVDEHEKEHALNRHSEKLAIAFGLISTDHG 319 R+ G+VP+ ++VL+DVDE EKEH L+RHSEKLA+A+GLI+T G Sbjct: 731 RISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKG 776