BLASTX nr result

ID: Coptis25_contig00038134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038134
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282613.1| PREDICTED: ribosomal protein L11 methyltrans...   102   2e-20
emb|CAN80068.1| hypothetical protein VITISV_019029 [Vitis vinifera]   102   2e-20
ref|XP_003526025.1| PREDICTED: ribosomal protein L11 methyltrans...    96   2e-18
ref|XP_002532935.1| RNA methyltransferase, putative [Ricinus com...    95   5e-18
gb|AFK42043.1| unknown [Lotus japonicus]                               93   2e-17

>ref|XP_002282613.1| PREDICTED: ribosomal protein L11 methyltransferase [Vitis vinifera]
           gi|302142971|emb|CBI20266.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +2

Query: 8   DNNDEICISSIYTDCQDVGSGISHAADSIGLTEIPSYKVIADDNDEWIRKTQESFVPVEL 187
           + ND+ICI SI++D QDV   ISHAADS+GL E+PSY+V   +  +WI+KTQESF PVE+
Sbjct: 98  EGNDKICIDSIFSDRQDVDVCISHAADSVGLKELPSYEVRVGEQYDWIKKTQESFCPVEV 157

Query: 188 TEDFWIVPEWTKPP 229
           TE  WIVPEW  PP
Sbjct: 158 TEGLWIVPEWRTPP 171


>emb|CAN80068.1| hypothetical protein VITISV_019029 [Vitis vinifera]
          Length = 943

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +2

Query: 8   DNNDEICISSIYTDCQDVGSGISHAADSIGLTEIPSYKVIADDNDEWIRKTQESFVPVEL 187
           + ND+ICI SI++D QDV   ISHAADS+GL E+PSY+V   +  +WI+KTQESF PVE+
Sbjct: 98  EGNDKICIDSIFSDRQDVDVCISHAADSVGLKELPSYEVRVGEQYDWIKKTQESFCPVEV 157

Query: 188 TEDFWIVPEWTKPP 229
           TE  WIVPEW  PP
Sbjct: 158 TEGLWIVPEWRTPP 171


>ref|XP_003526025.1| PREDICTED: ribosomal protein L11 methyltransferase-like [Glycine
           max]
          Length = 381

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 40/73 (54%), Positives = 56/73 (76%)
 Frame = +2

Query: 11  NNDEICISSIYTDCQDVGSGISHAADSIGLTEIPSYKVIADDNDEWIRKTQESFVPVELT 190
           + DEICISSI+ + +D+   ISHAADSIGL EIP Y+V  DD ++W++++QES  PV++T
Sbjct: 120 STDEICISSIFHEVEDINVSISHAADSIGLKEIPRYEVKIDDEEDWMKRSQESLHPVQVT 179

Query: 191 EDFWIVPEWTKPP 229
           E  W+VP+W  PP
Sbjct: 180 EGLWVVPKWCTPP 192


>ref|XP_002532935.1| RNA methyltransferase, putative [Ricinus communis]
           gi|223527299|gb|EEF29451.1| RNA methyltransferase,
           putative [Ricinus communis]
          Length = 373

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 40/74 (54%), Positives = 56/74 (75%)
 Frame = +2

Query: 8   DNNDEICISSIYTDCQDVGSGISHAADSIGLTEIPSYKVIADDNDEWIRKTQESFVPVEL 187
           D+++EIC+ SI+ +CQDV + +S AADS+GL +IP Y+V   +  +W+RKTQESF+PVE+
Sbjct: 122 DSSNEICMDSIFPECQDVDACLSQAADSVGLKKIPKYEVKMGEQYDWVRKTQESFLPVEV 181

Query: 188 TEDFWIVPEWTKPP 229
            E  WIVPEW   P
Sbjct: 182 AEGLWIVPEWRSAP 195


>gb|AFK42043.1| unknown [Lotus japonicus]
          Length = 397

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/70 (57%), Positives = 57/70 (81%)
 Frame = +2

Query: 17  DEICISSIYTDCQDVGSGISHAADSIGLTEIPSYKVIADDNDEWIRKTQESFVPVELTED 196
           DEICISSI+++ +D+  GISHAADSIGL EIP Y+V  ++ + W+++ QESF PVE+T+D
Sbjct: 129 DEICISSIFSEGEDINVGISHAADSIGLKEIPRYEVKVNE-ENWMKRAQESFCPVEVTKD 187

Query: 197 FWIVPEWTKP 226
            W+VP+W+ P
Sbjct: 188 LWVVPKWSAP 197


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