BLASTX nr result

ID: Coptis25_contig00038126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038126
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300772.1| NAC domain protein, IPR003441 [Populus trich...    99   4e-19
ref|XP_002272734.2| PREDICTED: NAC domain-containing protein 21/...    96   4e-18
emb|CBI37132.3| unnamed protein product [Vitis vinifera]               96   4e-18
emb|CAN60821.1| hypothetical protein VITISV_035076 [Vitis vinifera]    96   4e-18
ref|XP_003536942.1| PREDICTED: NAC domain-containing protein 21/...    94   1e-17

>ref|XP_002300772.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222842498|gb|EEE80045.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 280

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
 Frame = +3

Query: 3   RSLVGMRKTLVFYRDRAPHGIKTGWIMHEFRLEITAVSSK-DWVLCRVFHKSNGDSTCRY 179
           R +VGMRKTLVFY++RAP+GIKTGWIMHEFRLE   +  K DWVLCRVFHKS  + + R+
Sbjct: 106 REVVGMRKTLVFYKNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKAEDSTRF 165

Query: 180 NFEDEFDNTIGPSSPIFASLSPIS---QSMQGRLQPFIQVPETPHFQENNN 323
            FE   D+     S +  + SP +   Q++    Q  I +  TP  Q+  +
Sbjct: 166 MFESTTDS----GSTVNLTASPFTADHQTLARGYQQMISLSSTPPHQDQTS 212


>ref|XP_002272734.2| PREDICTED: NAC domain-containing protein 21/22 [Vitis vinifera]
          Length = 329

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = +3

Query: 9   LVGMRKTLVFYRDRAPHGIKTGWIMHEFRLEITAVSSK-DWVLCRVFHKSNGDSTCRYNF 185
           +VGMRKTLVFYR+RAP+GIKTGWIMHEFRLE   +  K DWVLCRVFHK+  +S+ + + 
Sbjct: 156 VVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKTKSESSSKLSP 215

Query: 186 EDEFDNTIGPSSP 224
           +  FD T   SSP
Sbjct: 216 QYVFDTTASASSP 228


>emb|CBI37132.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = +3

Query: 9   LVGMRKTLVFYRDRAPHGIKTGWIMHEFRLEITAVSSK-DWVLCRVFHKSNGDSTCRYNF 185
           +VGMRKTLVFYR+RAP+GIKTGWIMHEFRLE   +  K DWVLCRVFHK+  +S+ + + 
Sbjct: 108 VVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKTKSESSSKLSP 167

Query: 186 EDEFDNTIGPSSP 224
           +  FD T   SSP
Sbjct: 168 QYVFDTTASASSP 180


>emb|CAN60821.1| hypothetical protein VITISV_035076 [Vitis vinifera]
          Length = 257

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = +3

Query: 9   LVGMRKTLVFYRDRAPHGIKTGWIMHEFRLEITAVSSK-DWVLCRVFHKSNGDSTCRYNF 185
           +VGMRKTLVFYR+RAP+GIKTGWIMHEFRLE   +  K DWVLCRVFHK+  +S+ + + 
Sbjct: 84  VVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKTKSESSSKLSP 143

Query: 186 EDEFDNTIGPSSP 224
           +  FD T   SSP
Sbjct: 144 QYVFDTTASASSP 156


>ref|XP_003536942.1| PREDICTED: NAC domain-containing protein 21/22-like [Glycine max]
          Length = 397

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/110 (49%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
 Frame = +3

Query: 3   RSLVGMRKTLVFYRDRAPHGIKTGWIMHEFRLEITAVSSK-DWVLCRVFHKSNGDSTCR- 176
           R +VGMRKTLVFYR+RAP+GIKTGWIMHEFRLE   +  K DWVLCRVFHK   D++ + 
Sbjct: 106 REVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHLPPKEDWVLCRVFHKGKADNSAKL 165

Query: 177 YNFEDEFDN-TIGPSSPIFASLSPISQSMQGRLQPFIQVPETPHFQENNN 323
             +E    + T+  SSP   + +P S      L PF     T H   N++
Sbjct: 166 IMYESTVPSLTLASSSPTNQNTTP-SIGYNQFLAPFSSSMATHHHNHNHH 214


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