BLASTX nr result

ID: Coptis25_contig00038090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038090
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780...   112   2e-23
ref|XP_003525592.1| PREDICTED: uncharacterized protein LOC100796...   107   1e-21
ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227...   103   1e-20
ref|NP_001046945.2| Os02g0513700 [Oryza sativa Japonica Group] g...   101   6e-20
ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [S...   100   9e-20

>ref|XP_003543854.1| PREDICTED: uncharacterized protein LOC100780312 [Glycine max]
          Length = 557

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/88 (60%), Positives = 64/88 (72%)
 Frame = -2

Query: 267 VSPSGPMFLKAEDASGEYKDTAYMGALFMKEITGIGAEKVVQIITDNAPVCRVVGLVVEA 88
           V+ SGPMFLKA D S E KD  ++     + I  +G   VVQI+TDNA VC+  GL++EA
Sbjct: 89  VTESGPMFLKAIDCSNEIKDKDFIAKHMREVIMEVGHSNVVQIVTDNAAVCKAAGLIIEA 148

Query: 87  QHPSIFWTPCVVHTLNLALKNICAPANT 4
           + PSI+WTPCVVHTLNLALKNICA  NT
Sbjct: 149 EFPSIYWTPCVVHTLNLALKNICAAKNT 176


>ref|XP_003525592.1| PREDICTED: uncharacterized protein LOC100796054 [Glycine max]
          Length = 336

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/89 (58%), Positives = 63/89 (70%)
 Frame = -2

Query: 270 AVSPSGPMFLKAEDASGEYKDTAYMGALFMKEITGIGAEKVVQIITDNAPVCRVVGLVVE 91
           AV+ S PMFLKA D S E KD  ++  L  + I  +G   VVQI+TDN  V +  GL++E
Sbjct: 225 AVTESEPMFLKAIDCSNEIKDNDFIAKLTREVIMEVGHSNVVQIVTDNVVVYKATGLIIE 284

Query: 90  AQHPSIFWTPCVVHTLNLALKNICAPANT 4
           A+ PSI+WTPCVVHTLNLALKNICA  NT
Sbjct: 285 AEFPSIYWTPCVVHTLNLALKNICAAKNT 313


>ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227643 [Cucumis sativus]
          Length = 411

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/87 (57%), Positives = 61/87 (70%)
 Frame = -2

Query: 267 VSPSGPMFLKAEDASGEYKDTAYMGALFMKEITGIGAEKVVQIITDNAPVCRVVGLVVEA 88
           +S   PMFLK+ D SGE KD  ++  L  + I  +G E VVQ+ITDNAP C+ VG ++EA
Sbjct: 3   ISNGKPMFLKSVDCSGEIKDKYFIANLMKEVINEVGYENVVQVITDNAPNCKRVGQLIEA 62

Query: 87  QHPSIFWTPCVVHTLNLALKNICAPAN 7
           Q P I WT CVVHT+NLALKNICA  N
Sbjct: 63  QFPMIIWTLCVVHTVNLALKNICATKN 89


>ref|NP_001046945.2| Os02g0513700 [Oryza sativa Japonica Group]
           gi|255670935|dbj|BAF08859.2| Os02g0513700 [Oryza sativa
           Japonica Group]
          Length = 675

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/90 (53%), Positives = 62/90 (68%)
 Frame = -2

Query: 270 AVSPSGPMFLKAEDASGEYKDTAYMGALFMKEITGIGAEKVVQIITDNAPVCRVVGLVVE 91
           AV+  GPMFL+A +  GE K   Y+    +  I  +G + VVQ+ITDNA  CR  GL+VE
Sbjct: 265 AVTEDGPMFLRAINTEGEIKRKEYIAEKMIAVIEDVGPKNVVQVITDNAANCRAAGLIVE 324

Query: 90  AQHPSIFWTPCVVHTLNLALKNICAPANTA 1
            ++  IFWTPCVVHTLNLALKNICA  +++
Sbjct: 325 QRYSHIFWTPCVVHTLNLALKNICAAKSSS 354


>ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [Sorghum bicolor]
           gi|241944337|gb|EES17482.1| hypothetical protein
           SORBIDRAFT_08g022750 [Sorghum bicolor]
          Length = 684

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/86 (53%), Positives = 60/86 (69%)
 Frame = -2

Query: 270 AVSPSGPMFLKAEDASGEYKDTAYMGALFMKEITGIGAEKVVQIITDNAPVCRVVGLVVE 91
           AVS   PMFL+A++  G+YK   Y+       I  +G   VVQIITDNA  C+  GL++E
Sbjct: 193 AVSDKSPMFLRADNCEGDYKSKEYIAEKLKGIIEEVGRHNVVQIITDNAANCKGAGLIIE 252

Query: 90  AQHPSIFWTPCVVHTLNLALKNICAP 13
           +++ +IFWTPCVVHTLNLALK+IC P
Sbjct: 253 SEYDNIFWTPCVVHTLNLALKSICEP 278


Top