BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038089
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331971.1| glutamate-gated kainate-type ion channel rec...    61   8e-08
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...    61   8e-08
ref|XP_002305092.1| glutamate-gated kainate-type ion channel rec...    60   1e-07
ref|XP_002316840.1| glutamate-gated kainate-type ion channel rec...    60   2e-07
ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glyc...    56   3e-06

>ref|XP_002331971.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222874748|gb|EEF11879.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 407

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +2

Query: 62  HAVSFISAQDDIANIGAIIDVSSRIGKEEKVSMEIAIQTIYNASSNKHKLVLHVRDTGGN 241
           + V   ++   + NIGAIID +SR GKEEK +MEIA+Q   N S N HKL LH ++  G+
Sbjct: 44  YGVEAAASTTKVTNIGAIIDGNSRTGKEEKTAMEIAVQNFNNISRN-HKLSLHFKNPKGD 102

Query: 242 PLQ 250
           PLQ
Sbjct: 103 PLQ 105


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +2

Query: 95  IANIGAIIDVSSRIGKEEKVSMEIAIQTIYNASSNKHKLVLHVRDTGGNPLQ 250
           + NIGAIIDV+SR GKEEK +MEIA+Q  +N  S KHKL L+ +D+  +PLQ
Sbjct: 51  VTNIGAIIDVNSRTGKEEKTAMEIAVQK-FNNGSPKHKLSLYFQDSRSSPLQ 101


>ref|XP_002305092.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848056|gb|EEE85603.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 942

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 95  IANIGAIIDVSSRIGKEEKVSMEIAIQTIYNASSNKHKLVLHVRDTGGNPLQ 250
           + NIGAIIDV+SRIGKEEK ++E+A+Q  +N  S  H+L LH R  G +PLQ
Sbjct: 55  VTNIGAIIDVNSRIGKEEKTALELAVQD-FNDISTNHELSLHFRHPGEDPLQ 105


>ref|XP_002316840.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859905|gb|EEE97452.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 838

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/61 (52%), Positives = 40/61 (65%)
 Frame = +2

Query: 68  VSFISAQDDIANIGAIIDVSSRIGKEEKVSMEIAIQTIYNASSNKHKLVLHVRDTGGNPL 247
           V   +  + + NIGAIID +SR GKEEK +MEIA+Q   N S N HKL LH +   G+PL
Sbjct: 46  VEAAAGTNKVTNIGAIIDGNSRSGKEEKTAMEIAVQNFNNISRN-HKLSLHFKHPKGDPL 104

Query: 248 Q 250
           Q
Sbjct: 105 Q 105


>ref|XP_003541715.1| PREDICTED: glutamate receptor 2.7-like [Glycine max]
          Length = 910

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/57 (47%), Positives = 46/57 (80%)
 Frame = +2

Query: 80  SAQDDIANIGAIIDVSSRIGKEEKVSMEIAIQTIYNASSNKHKLVLHVRDTGGNPLQ 250
           +A + + +IGAIIDV+SRIGKE++V+++IA Q+ YN++S  +KL L+ R++  +PL+
Sbjct: 23  NANNKVISIGAIIDVNSRIGKEQQVALDIAAQS-YNSTSRTYKLALYFRNSTKDPLR 78