BLASTX nr result

ID: Coptis25_contig00038078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038078
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540876.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    71   1e-10
ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    71   1e-10
tpg|DAA38357.1| TPA: hypothetical protein ZEAMMB73_902336 [Zea m...    70   2e-10
ref|XP_002447553.1| hypothetical protein SORBIDRAFT_06g003290 [S...    70   2e-10
ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...    70   2e-10

>ref|XP_003540876.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1877

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/60 (63%), Positives = 41/60 (68%)
 Frame = +1

Query: 37  ASLLFIIY*YLTVFIVVFQQVALSTAANMC*KLASNAADFAMEFAPLLANLLHYHDSKVL 216
           A  L  +  YL  F    Q+VALSTAANMC KL S+AADF ME  PLL NLL YHDSKVL
Sbjct: 301 AGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVL 360


>ref|XP_003537809.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Glycine max]
          Length = 1872

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/60 (63%), Positives = 41/60 (68%)
 Frame = +1

Query: 37  ASLLFIIY*YLTVFIVVFQQVALSTAANMC*KLASNAADFAMEFAPLLANLLHYHDSKVL 216
           A  L  +  YL  F    Q+VALSTAANMC KL S+AADF ME  PLL NLL YHDSKVL
Sbjct: 299 AGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVL 358


>tpg|DAA38357.1| TPA: hypothetical protein ZEAMMB73_902336 [Zea mays]
           gi|414587787|tpg|DAA38358.1| TPA: hypothetical protein
           ZEAMMB73_902336 [Zea mays]
          Length = 1877

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = +1

Query: 37  ASLLFIIY*YLTVFIVVFQQVALSTAANMC*KLASNAADFAMEFAPLLANLLHYHDSKVL 216
           A  L  +  YL  F    Q+VALSTAANMC KL S+A+DF ME  PLL NLL+YHDSKVL
Sbjct: 305 AGALMAVLSYLDFFSTGVQRVALSTAANMCRKLPSDASDFVMEAVPLLTNLLNYHDSKVL 364


>ref|XP_002447553.1| hypothetical protein SORBIDRAFT_06g003290 [Sorghum bicolor]
           gi|241938736|gb|EES11881.1| hypothetical protein
           SORBIDRAFT_06g003290 [Sorghum bicolor]
          Length = 1819

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = +1

Query: 37  ASLLFIIY*YLTVFIVVFQQVALSTAANMC*KLASNAADFAMEFAPLLANLLHYHDSKVL 216
           A  L  +  YL  F    Q+VALSTAANMC KL S+A+DF ME  PLL NLL+YHDSKVL
Sbjct: 245 AGALMAVLSYLDFFSTGVQRVALSTAANMCRKLPSDASDFVMEAVPLLTNLLNYHDSKVL 304


>ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Cucumis sativus]
           gi|449489652|ref|XP_004158376.1| PREDICTED: E3
           ubiquitin-protein ligase UPL3-like [Cucumis sativus]
          Length = 1892

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 41/60 (68%)
 Frame = +1

Query: 37  ASLLFIIY*YLTVFIVVFQQVALSTAANMC*KLASNAADFAMEFAPLLANLLHYHDSKVL 216
           A  L  +  YL  F    Q+VALSTAANMC KL S+AADF ME  PLL NLL YHD+KVL
Sbjct: 303 AGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVL 362


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