BLASTX nr result

ID: Coptis25_contig00038076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038076
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520754.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_002307577.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CBI32340.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002300851.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_003520209.1| PREDICTED: uncharacterized protein LOC100786...    55   8e-06

>ref|XP_002520754.1| conserved hypothetical protein [Ricinus communis]
           gi|223540139|gb|EEF41716.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = -2

Query: 169 NKSNPKFHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIGNNSQMSKKP 2
           +KSNP+ HSRT+  ++   GG+GM+AIFLDS ++ CGTG FLP+  G N   SKKP
Sbjct: 62  SKSNPRAHSRTRHPTNGASGGSGMRAIFLDSGKQTCGTGVFLPRRAGTNLPFSKKP 117


>ref|XP_002307577.1| predicted protein [Populus trichocarpa] gi|222857026|gb|EEE94573.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 SVDKIHRNNHPFN-KSNPKFHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIG 29
           S+ K+ ++ HP   KS+P+   RTK  ++   GG GMQA+FLDS +K  GTG FLPQ  G
Sbjct: 47  SLPKLPQDPHPQRPKSSPRPDCRTKYATNWASGGPGMQAVFLDSGKKSSGTGVFLPQRAG 106

Query: 28  NNSQMSKKP 2
            N Q SKKP
Sbjct: 107 TNMQSSKKP 115


>emb|CBI32340.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 16/78 (20%)
 Frame = -2

Query: 187 RNNHPF----------------NKSNPKFHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGT 56
           R NHP+                +K + K H +++  ++   GG GMQAIFLDS ++ CGT
Sbjct: 58  RKNHPYLINCLFLLLMMMMKQHSKYSLKPHQKSRFPTNWASGGPGMQAIFLDSGRRSCGT 117

Query: 55  GFFLPQMIGNNSQMSKKP 2
           G FLP+  G N Q SKKP
Sbjct: 118 GVFLPRRAGTNFQPSKKP 135


>ref|XP_002300851.1| predicted protein [Populus trichocarpa] gi|222842577|gb|EEE80124.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 SVDKIHRNNHPFN-KSNPKFHSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQMIG 29
           S+ ++  + HP   K +P  + R K  ++   GG GMQA+FLDS +K  GTG FLPQ  G
Sbjct: 48  SLPRLPLDQHPQRTKPSPGPNCRAKYATNWASGGPGMQAVFLDSGKKSSGTGVFLPQGAG 107

Query: 28  NNSQMSKKP 2
            N Q  KKP
Sbjct: 108 TNMQSRKKP 116


>ref|XP_003520209.1| PREDICTED: uncharacterized protein LOC100786285 [Glycine max]
          Length = 194

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
 Frame = -2

Query: 196 KIHRNNHPFNKSNPKF------HSRTKLQSSRGPGGTGMQAIFLDSSQKPCGTGFFLPQM 35
           ++H+  H  +   PK       + R KL ++ GPG   M+AIFL S  + CGTG FLPQ 
Sbjct: 46  QMHQKRHHKSPGEPKSQYSKSAYQRPKLATNGGPG---MRAIFLGSGHRSCGTGVFLPQR 102

Query: 34  IGNNSQMSKKP 2
            G N Q SK+P
Sbjct: 103 AGTNFQPSKRP 113


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