BLASTX nr result

ID: Coptis25_contig00038073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038073
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298291.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52
ref|XP_002513522.1| conserved hypothetical protein [Ricinus comm...   210   4e-52
ref|XP_002274339.2| PREDICTED: uncharacterized protein LOC100258...   207   4e-51
emb|CBI17181.3| unnamed protein product [Vitis vinifera]              204   2e-50
emb|CAN81659.1| hypothetical protein VITISV_006042 [Vitis vinifera]   204   2e-50

>ref|XP_002298291.1| predicted protein [Populus trichocarpa] gi|222845549|gb|EEE83096.1|
           predicted protein [Populus trichocarpa]
          Length = 979

 Score =  211 bits (537), Expect = 3e-52
 Identities = 107/196 (54%), Positives = 138/196 (70%), Gaps = 5/196 (2%)
 Frame = -2

Query: 733 FHLKFFILVFLRINHLVALNPSSWCPHHLTHMTTQIFEKRTDRFWELDKKSNSWVEVNLP 554
           FHL FFILV L ++    L  +SWCPH+      + FE++TDRFWE  ++SN+WVEV LP
Sbjct: 4   FHLIFFILVLLSLS----LGSASWCPHNYAQQKNREFEQKTDRFWEFQEQSNTWVEVELP 59

Query: 553 FALLSCVNDNCSKVASIDQTPKKKEECLEGGCFVPEHGEDSKSKYSNKAESEEG-----S 389
           + L+SCVNDNC+KV  I    +  EE  E         +DSK   + K + E+G     S
Sbjct: 60  YELVSCVNDNCTKVGKIHPVKRDVEENSE------RENDDSKKNENLKRKVEDGGTEANS 113

Query: 388 DMVLNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLIN 209
           ++VL +RKRISLT+MSE+SI VTGESGSIYERFWNG+QWVIAPHDLP+  G A+ VF++N
Sbjct: 114 EIVLPLRKRISLTKMSESSIWVTGESGSIYERFWNGIQWVIAPHDLPVLTGHAICVFIVN 173

Query: 208 QTILALSEAGYLYKVV 161
           QTIL LSEAG LY+++
Sbjct: 174 QTILTLSEAGTLYQMM 189


>ref|XP_002513522.1| conserved hypothetical protein [Ricinus communis]
           gi|223547430|gb|EEF48925.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 942

 Score =  210 bits (535), Expect = 4e-52
 Identities = 106/191 (55%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
 Frame = -2

Query: 733 FHLKFFILVFLRINHLVALNPSSWCPHHLTHMTTQIFEKRTDRFWELDKKSNSWVEVNLP 554
           FH  FF  V +  +  + L+ +  CP      + + FE++TDRFWE  ++SN+WVEV LP
Sbjct: 4   FHFVFFFWVLMSGSRFLILSSAFCCPQDYVKQSNRQFEQKTDRFWEFQEESNTWVEVKLP 63

Query: 553 FALLSCVNDNCSKVASIDQTPK-KKEECLEGGCFVPEHGEDSKSKYSNKAESEEGSDMVL 377
           + L+SC+NDNC+KV SIDQ  K K+EE LE    V    E  K K  +   +EE S+++L
Sbjct: 64  YDLVSCINDNCTKVGSIDQVTKNKEEEHLEREYDVSGQTESLKEKDGDGEVAEENSEVIL 123

Query: 376 NIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQTIL 197
             RKRISLTRMSETSI VTGESGS+YERFWNGVQWVIAPHDLP+ AG A+ VF +N TIL
Sbjct: 124 PQRKRISLTRMSETSIWVTGESGSVYERFWNGVQWVIAPHDLPILAGHAICVFFVNHTIL 183

Query: 196 ALSEAGYLYKV 164
           ALSE G LY++
Sbjct: 184 ALSEVGVLYQM 194


>ref|XP_002274339.2| PREDICTED: uncharacterized protein LOC100258526 [Vitis vinifera]
          Length = 949

 Score =  207 bits (527), Expect = 4e-51
 Identities = 114/197 (57%), Positives = 138/197 (70%), Gaps = 4/197 (2%)
 Frame = -2

Query: 742 MVEFHLKFFILVFL-RINHLVALNPSSWCPHHLTHMTTQIFEKRTDRFWELDKKSNSWVE 566
           M  F   +F+ VFL +    VA   SSWCPH       + F ++TDRFWE +++SNSWVE
Sbjct: 1   MCRFLFMWFMWVFLLKSCWSVAFGSSSWCPHGFVQQRNREFLQKTDRFWEFEEQSNSWVE 60

Query: 565 VNLPFALLSCVNDNCSKVASIDQTPKKKEECLE--GGCFVPEHGEDS-KSKYSNKAESEE 395
           V LPF L+SCV+ NC+KV SI  T KK+E+  E  G  F  E    S K K  +    EE
Sbjct: 61  VKLPFDLVSCVDGNCTKVGSIHGTKKKEEDEEERLGREFGGEEERGSLKKKDGHGGGPEE 120

Query: 394 GSDMVLNIRKRISLTRMSETSILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFL 215
             D+VL  RKR+SLT+MSETSI VTGESG+IYERFWNG+QWVIAPHDLP+SAG AVSVF+
Sbjct: 121 NPDVVLPRRKRLSLTKMSETSIWVTGESGAIYERFWNGLQWVIAPHDLPISAGHAVSVFI 180

Query: 214 INQTILALSEAGYLYKV 164
           INQTILALSE G LY++
Sbjct: 181 INQTILALSEPGNLYQM 197


>emb|CBI17181.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  204 bits (520), Expect = 2e-50
 Identities = 108/177 (61%), Positives = 129/177 (72%), Gaps = 3/177 (1%)
 Frame = -2

Query: 685 VALNPSSWCPHHLTHMTTQIFEKRTDRFWELDKKSNSWVEVNLPFALLSCVNDNCSKVAS 506
           VA   SSWCPH       + F ++TDRFWE +++SNSWVEV LPF L+SCV+ NC+KV S
Sbjct: 20  VAFGSSSWCPHGFVQQRNREFLQKTDRFWEFEEQSNSWVEVKLPFDLVSCVDGNCTKVGS 79

Query: 505 IDQTPKKKEECLE--GGCFVPEHGEDS-KSKYSNKAESEEGSDMVLNIRKRISLTRMSET 335
           I  T KK+E+  E  G  F  E    S K K  +    EE  D+VL  RKR+SLT+MSET
Sbjct: 80  IHGTKKKEEDEEERLGREFGGEEERGSLKKKDGHGGGPEENPDVVLPRRKRLSLTKMSET 139

Query: 334 SILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQTILALSEAGYLYKV 164
           SI VTGESG+IYERFWNG+QWVIAPHDLP+SAG AVSVF+INQTILALSE G LY++
Sbjct: 140 SIWVTGESGAIYERFWNGLQWVIAPHDLPISAGHAVSVFIINQTILALSEPGNLYQM 196


>emb|CAN81659.1| hypothetical protein VITISV_006042 [Vitis vinifera]
          Length = 952

 Score =  204 bits (520), Expect = 2e-50
 Identities = 108/177 (61%), Positives = 129/177 (72%), Gaps = 3/177 (1%)
 Frame = -2

Query: 685 VALNPSSWCPHHLTHMTTQIFEKRTDRFWELDKKSNSWVEVNLPFALLSCVNDNCSKVAS 506
           VA   SSWCPH       + F ++TDRFWE +++SNSWVEV LPF L+SCV+ NC+KV S
Sbjct: 20  VAFGSSSWCPHGFVQQRNREFLQKTDRFWEFEEQSNSWVEVKLPFDLVSCVDGNCTKVGS 79

Query: 505 IDQTPKKKEECLE--GGCFVPEHGEDS-KSKYSNKAESEEGSDMVLNIRKRISLTRMSET 335
           I  T KK+E+  E  G  F  E    S K K  +    EE  D+VL  RKR+SLT+MSET
Sbjct: 80  IHGTKKKEEDEEERLGREFGGEEERGSLKKKDGHGGGPEENPDVVLPRRKRLSLTKMSET 139

Query: 334 SILVTGESGSIYERFWNGVQWVIAPHDLPLSAGPAVSVFLINQTILALSEAGYLYKV 164
           SI VTGESG+IYERFWNG+QWVIAPHDLP+SAG AVSVF+INQTILALSE G LY++
Sbjct: 140 SIWVTGESGAIYERFWNGLQWVIAPHDLPISAGHAVSVFIINQTILALSEPGNLYQM 196


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