BLASTX nr result

ID: Coptis25_contig00038057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038057
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]   143   4e-32
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]   142   1e-31
emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]   139   1e-30
emb|CAN81408.1| hypothetical protein VITISV_010447 [Vitis vinifera]   138   2e-30
emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]   136   5e-30

>emb|CAN63016.1| hypothetical protein VITISV_017409 [Vitis vinifera]
          Length = 873

 Score =  143 bits (361), Expect = 4e-32
 Identities = 70/138 (50%), Positives = 91/138 (65%), Gaps = 5/138 (3%)
 Frame = -3

Query: 400 EIFMMTSSVGCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRV 221
           E+    +  GC   N P+ YLGLPLGAS++S  +WD V ERF  +LA WK ++ S G R+
Sbjct: 423 EVDRAAAVFGCKVGNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRL 482

Query: 220 ILIKNIFSSLLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRRE 56
            LIK+  S+L +Y+M     P  V  RLE I R+FLW D E+R + HLVRWE +C   R 
Sbjct: 483 TLIKSTLSNLPIYFMSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVRWEVICKDMRH 542

Query: 55  GGLGIRSLREFNHALLGK 2
           GGLG+R L++FNHALLGK
Sbjct: 543 GGLGLRYLKDFNHALLGK 560


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score =  142 bits (358), Expect = 1e-31
 Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 5/138 (3%)
 Frame = -3

Query: 400  EIFMMTSSVGCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRV 221
            E+    +  GC   N P+ YLGLPLGAS++S  +WD V ERF  +LA WK ++ S G R+
Sbjct: 720  EVDRAAAVFGCKVGNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRL 779

Query: 220  ILIKNIFSSLLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRRE 56
             LIK+  S+L +Y+M     P  V  RLE I R+FLW D E+R + HLVRWE  C   R 
Sbjct: 780  TLIKSTLSNLPIYFMSLFVIPRKVRLRLEKIQREFLWGDMEERRKIHLVRWEVTCKDMRH 839

Query: 55   GGLGIRSLREFNHALLGK 2
            GGLG+R L++FNHALLGK
Sbjct: 840  GGLGLRYLKDFNHALLGK 857


>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score =  139 bits (349), Expect = 1e-30
 Identities = 68/129 (52%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
 Frame = -3

Query: 373 GCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRVILIKNIFSS 194
           GC   N P+ YLGLPLGA + S  +WD V ERF  +LA WK ++ S G R+ LIK+  S+
Sbjct: 37  GCKVGNLPTTYLGLPLGALHNSCRVWDGVEERFKRKLATWKKQYLSKGGRLTLIKSTLSN 96

Query: 193 LLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRREGGLGIRSLR 29
           L +Y+M     P  V  RLE I R+FLW D E R R HLVRW  +C  ++ GGLG+R L+
Sbjct: 97  LPIYFMSLFVIPRKVRIRLEKIQREFLWGDVEGRRRIHLVRWTAICKDKKYGGLGLRHLK 156

Query: 28  EFNHALLGK 2
           EFNHALLGK
Sbjct: 157 EFNHALLGK 165


>emb|CAN81408.1| hypothetical protein VITISV_010447 [Vitis vinifera]
          Length = 734

 Score =  138 bits (347), Expect = 2e-30
 Identities = 67/129 (51%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
 Frame = -3

Query: 373 GCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRVILIKNIFSS 194
           GC   N P+ YLGLPLGA + S  +WD V ERF  +LA WK ++ S G R+ LIK+  S+
Sbjct: 128 GCKVGNLPTTYLGLPLGAPHNSCRVWDVVEERFKRKLATWKKQYLSKGGRLTLIKSTLSN 187

Query: 193 LLVYYMPSSVANR-----LESIIRDFLWDDSEDRHRFHLVRWERVCMSRREGGLGIRSLR 29
           L +Y+M   V  R     LE I R+FLW D E+R + HLVRW  +C  +R GGLG+R L+
Sbjct: 188 LPIYFMSLFVIQRKVRFRLEKIQREFLWGDLEERRKIHLVRWTXICKDKRYGGLGLRHLK 247

Query: 28  EFNHALLGK 2
           EFNHALLGK
Sbjct: 248 EFNHALLGK 256


>emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  136 bits (343), Expect = 5e-30
 Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 5/138 (3%)
 Frame = -3

Query: 400  EIFMMTSSVGCTTDNFPSRYLGLPLGASYRSISIWDTVIERFSCRLAGWKGRF*SMGDRV 221
            E+  + +  GC   N P+ YLGLPLGAS++S  +WD V ERF  +LA WK ++ S G R+
Sbjct: 1542 EVDRVGAVFGCKVGNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRL 1601

Query: 220  ILIKNIFSSLLVYYM-----PSSVANRLESIIRDFLWDDSEDRHRFHLVRWERVCMSRRE 56
             LIK+  S+L +Y+M     P  V  RLE I   FLW D E+R + HLVR E +C  +R 
Sbjct: 1602 TLIKSTLSNLPIYFMSLFVIPRKVRLRLEKIQXXFLWGDMEERRKIHLVRXEVICKBKRH 1661

Query: 55   GGLGIRSLREFNHALLGK 2
            GGLG+R L++FNHALLGK
Sbjct: 1662 GGLGLRYLKDFNHALLGK 1679


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