BLASTX nr result

ID: Coptis25_contig00038054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038054
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]         213   2e-53
ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin ...   210   1e-52
ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing pr...   205   5e-51
ref|XP_003533747.1| PREDICTED: leucine-rich repeat protein lrrA-...   205   5e-51
emb|CBI17882.3| unnamed protein product [Vitis vinifera]              205   5e-51

>dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  213 bits (541), Expect = 2e-53
 Identities = 108/161 (67%), Positives = 122/161 (75%)
 Frame = +3

Query: 87  MQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCRS 266
           +QNIPESL ARLLNMV+LD+HSNQL+SLPNS+GCL KLK LN SGN +E LPK+IENCR+
Sbjct: 66  LQNIPESLTARLLNMVVLDVHSNQLRSLPNSVGCLSKLKVLNVSGNLIEYLPKSIENCRA 125

Query: 267 LEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDARLNCLRS 446
           LEELNANFNKL  LP+TMGFE               FLP S +HLT+L+ILDARLNCLRS
Sbjct: 126 LEELNANFNKLSQLPDTMGFELLNLKKLSVNSNKLVFLPRSTSHLTSLKILDARLNCLRS 185

Query: 447 LPDGXXXXXXXXXXXVSQNFQYLGALPYSIGLLMSLIELDV 569
           LPD            VSQNFQYL  LPYSIGLL+SL+ELDV
Sbjct: 186 LPDDLENLINLETLNVSQNFQYLDTLPYSIGLLLSLVELDV 226


>ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin homology
           domain-containing protein 1-like [Glycine max]
          Length = 360

 Score =  210 bits (535), Expect = 1e-52
 Identities = 109/177 (61%), Positives = 127/177 (71%)
 Frame = +3

Query: 39  SIEFYDVSRLKVGILFMQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNAS 218
           S+    + +L +    + NIPESL ARLLNMV+LD+HSNQL+SLPNSIGCLYKLK LN S
Sbjct: 54  SLNLATICKLDLSNNNLLNIPESLTARLLNMVVLDVHSNQLRSLPNSIGCLYKLKVLNVS 113

Query: 219 GNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTH 398
           GN +E LPKTIENCRSLEELNANFNKL  LP+T+G+E               FLP S +H
Sbjct: 114 GNLIEYLPKTIENCRSLEELNANFNKLIQLPDTIGYELKNLKKLSVNSNKLVFLPRSTSH 173

Query: 399 LTNLRILDARLNCLRSLPDGXXXXXXXXXXXVSQNFQYLGALPYSIGLLMSLIELDV 569
           LT LRILDARLNCLRSLP+            VSQNFQYL +LPYS+G L+SL+ELDV
Sbjct: 174 LTALRILDARLNCLRSLPEDLENLINLETLNVSQNFQYLDSLPYSVGFLLSLVELDV 230


>ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
           vinifera]
          Length = 351

 Score =  205 bits (521), Expect = 5e-51
 Identities = 105/160 (65%), Positives = 121/160 (75%)
 Frame = +3

Query: 87  MQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCRS 266
           +QNIPESL ARLLN+VILD+HSNQLKSLPNSIGCL KLK LN SGN +++LPKTIENCRS
Sbjct: 69  LQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCRS 128

Query: 267 LEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDARLNCLRS 446
           LEELNANFN+L  LP+T+GFE                LP S +HLT+L++LDARLNCLR+
Sbjct: 129 LEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRA 188

Query: 447 LPDGXXXXXXXXXXXVSQNFQYLGALPYSIGLLMSLIELD 566
           LP+            VSQNFQYL  LPYSIGLLMSL+ELD
Sbjct: 189 LPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELD 228



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = +3

Query: 36  LSIEFYDVSRLKVGILFMQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNA 215
           +  E  ++ +L V    +  +P S  + L ++ +LD   N L++LP  +  L  L+ LN 
Sbjct: 146 IGFELLNIKKLSVNSNKLMLLPSS-TSHLTSLQVLDARLNCLRALPEDLENLINLQVLNV 204

Query: 216 SGNS--LESLPKTIENCRSLEELNANFNKLKSLPETMG 323
           S N   LE+LP +I    SL EL+A++N++ +LP++MG
Sbjct: 205 SQNFQYLETLPYSIGLLMSLVELDASYNRITTLPDSMG 242


>ref|XP_003533747.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 355

 Score =  205 bits (521), Expect = 5e-51
 Identities = 107/177 (60%), Positives = 126/177 (71%)
 Frame = +3

Query: 39  SIEFYDVSRLKVGILFMQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNAS 218
           S++   + +L +    +Q IPESL ARLLN+ +LD+ SNQLKSLPNSIGCL KLK LN S
Sbjct: 53  SLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLKSLPNSIGCLSKLKVLNVS 112

Query: 219 GNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTH 398
           GN +ESLPKTIENCR+LEELNANFNKL  LP+T+GFE               FLP S +H
Sbjct: 113 GNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELVNLKKLSVNSNKLVFLPSSTSH 172

Query: 399 LTNLRILDARLNCLRSLPDGXXXXXXXXXXXVSQNFQYLGALPYSIGLLMSLIELDV 569
           LT L++LDARLNCLR+LP+            VSQNFQYL  LPYSIGLL+SLIELDV
Sbjct: 173 LTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLDTLPYSIGLLLSLIELDV 229


>emb|CBI17882.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  205 bits (521), Expect = 5e-51
 Identities = 105/160 (65%), Positives = 121/160 (75%)
 Frame = +3

Query: 87  MQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCRS 266
           +QNIPESL ARLLN+VILD+HSNQLKSLPNSIGCL KLK LN SGN +++LPKTIENCRS
Sbjct: 26  LQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCRS 85

Query: 267 LEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDARLNCLRS 446
           LEELNANFN+L  LP+T+GFE                LP S +HLT+L++LDARLNCLR+
Sbjct: 86  LEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRA 145

Query: 447 LPDGXXXXXXXXXXXVSQNFQYLGALPYSIGLLMSLIELD 566
           LP+            VSQNFQYL  LPYSIGLLMSL+ELD
Sbjct: 146 LPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELD 185



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = +3

Query: 36  LSIEFYDVSRLKVGILFMQNIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNA 215
           +  E  ++ +L V    +  +P S  + L ++ +LD   N L++LP  +  L  L+ LN 
Sbjct: 103 IGFELLNIKKLSVNSNKLMLLPSS-TSHLTSLQVLDARLNCLRALPEDLENLINLQVLNV 161

Query: 216 SGNS--LESLPKTIENCRSLEELNANFNKLKSLPETMG 323
           S N   LE+LP +I    SL EL+A++N++ +LP++MG
Sbjct: 162 SQNFQYLETLPYSIGLLMSLVELDASYNRITTLPDSMG 199


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