BLASTX nr result

ID: Coptis25_contig00038050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038050
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159939.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ doma...   194   5e-48
ref|XP_004143897.1| PREDICTED: BTB/POZ domain-containing protein...   194   5e-48
dbj|BAF62469.1| hypothetical protein [Nicotiana tabacum]              187   6e-46
ref|XP_003631414.1| PREDICTED: BTB/POZ domain-containing protein...   183   1e-44
ref|XP_003525389.1| PREDICTED: BTB/POZ domain-containing protein...   179   2e-43

>ref|XP_004159939.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein
           At5g41330-like [Cucumis sativus]
          Length = 476

 Score =  194 bits (494), Expect = 5e-48
 Identities = 97/144 (67%), Positives = 118/144 (81%)
 Frame = +2

Query: 2   TINVGGXXXXXXXXXXXXAGSNSLLYTISLSSSNIVPFIDRDPEIFSILLSLLRTSNLPS 181
           T+NVGG            AGS+SLL TIS SS ++VPFIDRDP++FS++LSLLRT  LPS
Sbjct: 28  TVNVGGHLFQTTKQTLAIAGSSSLLSTISDSSQSLVPFIDRDPDLFSLILSLLRTGYLPS 87

Query: 182 KAKTIDLQDLIFEAEFYGLGELLVSSLSNPSQFEAFNLERSLVLPLSGRDSPSVISTTDS 361
           KAK  DLQDLI E++FYG+  LL++SLSNPSQFEAFNLE+SL+LPL+GRDSPS I++T  
Sbjct: 88  KAKAFDLQDLISESQFYGVESLLINSLSNPSQFEAFNLEKSLILPLNGRDSPSTIASTPF 147

Query: 362 GSLHVAHGSKITSFDWSLKKKSTI 433
           GSLHVAHG KITSFDWSL++K+TI
Sbjct: 148 GSLHVAHGGKITSFDWSLQRKTTI 171


>ref|XP_004143897.1| PREDICTED: BTB/POZ domain-containing protein At5g41330-like
           [Cucumis sativus]
          Length = 476

 Score =  194 bits (494), Expect = 5e-48
 Identities = 97/144 (67%), Positives = 118/144 (81%)
 Frame = +2

Query: 2   TINVGGXXXXXXXXXXXXAGSNSLLYTISLSSSNIVPFIDRDPEIFSILLSLLRTSNLPS 181
           T+NVGG            AGS+SLL TIS SS ++VPFIDRDP++FS++LSLLRT  LPS
Sbjct: 28  TVNVGGHLFQTTKQTLAIAGSSSLLSTISDSSQSLVPFIDRDPDLFSLILSLLRTGYLPS 87

Query: 182 KAKTIDLQDLIFEAEFYGLGELLVSSLSNPSQFEAFNLERSLVLPLSGRDSPSVISTTDS 361
           KAK  DLQDLI E++FYG+  LL++SLSNPSQFEAFNLE+SL+LPL+GRDSPS I++T  
Sbjct: 88  KAKAFDLQDLISESQFYGVESLLINSLSNPSQFEAFNLEKSLILPLNGRDSPSTIASTPF 147

Query: 362 GSLHVAHGSKITSFDWSLKKKSTI 433
           GSLHVAHG KITSFDWSL++K+TI
Sbjct: 148 GSLHVAHGGKITSFDWSLQRKTTI 171


>dbj|BAF62469.1| hypothetical protein [Nicotiana tabacum]
          Length = 463

 Score =  187 bits (476), Expect = 6e-46
 Identities = 95/144 (65%), Positives = 114/144 (79%)
 Frame = +2

Query: 2   TINVGGXXXXXXXXXXXXAGSNSLLYTISLSSSNIVPFIDRDPEIFSILLSLLRTSNLPS 181
           TI+VGG            +GS SLL  I+  +  ++PFIDRDPEIFSILLSLLRT NLPS
Sbjct: 27  TIDVGGQLFQTTKQTLKQSGSKSLLSEITNFNDGVLPFIDRDPEIFSILLSLLRTGNLPS 86

Query: 182 KAKTIDLQDLIFEAEFYGLGELLVSSLSNPSQFEAFNLERSLVLPLSGRDSPSVISTTDS 361
           KAKT D+QDLIFE++FYG+  LL++S SNPSQFE F+LE+S++LPLSGRDSP+ ISTT  
Sbjct: 87  KAKTFDIQDLIFESQFYGVEHLLLNSQSNPSQFEPFDLEKSVILPLSGRDSPTAISTTQL 146

Query: 362 GSLHVAHGSKITSFDWSLKKKSTI 433
           GS+ VAHG KITSFDWSLK+KSTI
Sbjct: 147 GSVQVAHGCKITSFDWSLKRKSTI 170


>ref|XP_003631414.1| PREDICTED: BTB/POZ domain-containing protein At5g41330-like [Vitis
           vinifera]
          Length = 464

 Score =  183 bits (465), Expect = 1e-44
 Identities = 97/147 (65%), Positives = 113/147 (76%), Gaps = 3/147 (2%)
 Frame = +2

Query: 2   TINVGGXXXXXXXXXXXXAGSNSL---LYTISLSSSNIVPFIDRDPEIFSILLSLLRTSN 172
           TI+VGG            AG  SL   +  +  S+    PFIDRDP++FSILLSLLRT N
Sbjct: 20  TIDVGGQIFQTTKQTLTLAGPKSLFSKILDLPASAQIGFPFIDRDPDLFSILLSLLRTGN 79

Query: 173 LPSKAKTIDLQDLIFEAEFYGLGELLVSSLSNPSQFEAFNLERSLVLPLSGRDSPSVIST 352
           LPSKAK +DLQDL  EA+FYG+  LLVSSLSNPSQF+AFNLE+SL+LPL+GRDSPS IST
Sbjct: 80  LPSKAKAVDLQDLFSEAKFYGIESLLVSSLSNPSQFDAFNLEKSLILPLNGRDSPSAIST 139

Query: 353 TDSGSLHVAHGSKITSFDWSLKKKSTI 433
           T  GS+HVAHGSKITSFDWSL++KSTI
Sbjct: 140 TMFGSVHVAHGSKITSFDWSLQRKSTI 166


>ref|XP_003525389.1| PREDICTED: BTB/POZ domain-containing protein At5g41330-like
           [Glycine max]
          Length = 458

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/145 (62%), Positives = 112/145 (77%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   TINVGGXXXXXXXXXXXXAGSNSLLYTISLSSSNI-VPFIDRDPEIFSILLSLLRTSNLP 178
           +I+VGG            AG  +    I+  SS +  PF+DRDP++FS+LLSLLRT NLP
Sbjct: 21  SIDVGGQLFQTTKQTLTSAGPKTFFSRIAAESSGLHTPFLDRDPDLFSLLLSLLRTGNLP 80

Query: 179 SKAKTIDLQDLIFEAEFYGLGELLVSSLSNPSQFEAFNLERSLVLPLSGRDSPSVISTTD 358
           SKAKT DLQDL  E++FYG+  LLV+SLSNPSQ E FNL++SL+LPL+GRDSPS ++TT 
Sbjct: 81  SKAKTFDLQDLTIESKFYGIESLLVNSLSNPSQLEPFNLQKSLLLPLNGRDSPSALATTA 140

Query: 359 SGSLHVAHGSKITSFDWSLKKKSTI 433
           SGSLHVAHGSKITSFDWSL++KST+
Sbjct: 141 SGSLHVAHGSKITSFDWSLRRKSTV 165


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