BLASTX nr result

ID: Coptis25_contig00038028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038028
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518125.1| Vesicle-associated membrane protein, putativ...    94   1e-17
ref|XP_002304708.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002264270.1| PREDICTED: putative vesicle-associated membr...    93   3e-17
emb|CAN65946.1| hypothetical protein VITISV_029427 [Vitis vinifera]    93   3e-17
ref|XP_002267063.1| PREDICTED: putative vesicle-associated membr...    92   4e-17

>ref|XP_002518125.1| Vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223542721|gb|EEF44258.1| Vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 219

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/69 (69%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWVANMKXXXXXXXXXXXXXX 181
           NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMW+ NMK              
Sbjct: 148 NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKIKLIVLGIIIALIL 207

Query: 182 XXXXSVCRG 208
               SVC G
Sbjct: 208 IIVLSVCHG 216


>ref|XP_002304708.1| predicted protein [Populus trichocarpa] gi|222842140|gb|EEE79687.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/69 (69%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWVANMKXXXXXXXXXXXXXX 181
           NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMW+ NMK              
Sbjct: 148 NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMKMKLIVLGIIIALIL 207

Query: 182 XXXXSVCRG 208
               SVC G
Sbjct: 208 IIVLSVCHG 216


>ref|XP_002264270.1| PREDICTED: putative vesicle-associated membrane protein 726 [Vitis
           vinifera] gi|296090506|emb|CBI40837.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWVANMKXXXXXXXXXXXXXX 181
           NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMW+ NMK              
Sbjct: 149 NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWMQNMKIKLIVLGIIIALIL 208

Query: 182 XXXXSVCRG 208
               S+C G
Sbjct: 209 IIVLSICHG 217


>emb|CAN65946.1| hypothetical protein VITISV_029427 [Vitis vinifera]
          Length = 200

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWVANMKXXXXXXXXXXXXXX 181
           NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMW+ NMK              
Sbjct: 129 NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWMQNMKIKLIVLGIIIALIL 188

Query: 182 XXXXSVCRG 208
               S+C G
Sbjct: 189 IIVLSICHG 197


>ref|XP_002267063.1| PREDICTED: putative vesicle-associated membrane protein 726 isoform
           1 [Vitis vinifera] gi|297744308|emb|CBI37278.3| unnamed
           protein product [Vitis vinifera]
          Length = 219

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/69 (68%), Positives = 49/69 (71%)
 Frame = +2

Query: 2   NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWVANMKXXXXXXXXXXXXXX 181
           NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMW+ NMK              
Sbjct: 148 NIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWLQNMKIKLIVLGILIALIL 207

Query: 182 XXXXSVCRG 208
               S+C G
Sbjct: 208 IIVLSICGG 216


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