BLASTX nr result

ID: Coptis25_contig00038026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038026
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263186.2| PREDICTED: LRR receptor-like serine/threonin...    63   2e-08
ref|XP_002263151.2| PREDICTED: LRR receptor-like serine/threonin...    55   8e-06

>ref|XP_002263186.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           HSL2-like [Vitis vinifera]
          Length = 657

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
 Frame = -3

Query: 266 LCSPDLKPFPPCLKTKASTWFLI--WAIFCLSLAVLVFWFVKTKRRTIDGKRLLPWKLTS 93
           LCSP+LKP PPC ++K +T +LI   AIF L L   +FWF+KT+ +   GKR   WK T 
Sbjct: 286 LCSPNLKPLPPCSRSKPATLYLIGVLAIFTLILLGSLFWFLKTRSKIFGGKRKGQWKTTI 345

Query: 92  FHRL 81
           F  +
Sbjct: 346 FQSI 349


>ref|XP_002263151.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           HSL2-like [Vitis vinifera]
          Length = 978

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
 Frame = -3

Query: 266 LCSPDLKPFPPCLKTKASTWFLIWAIFCLSLAVL---VFWFVKTKRRTIDGKRLLPWKLT 96
           LCSP+LKP PPC ++K  T +LI  +   +L +L   +FWF+KT+ +    K    WK T
Sbjct: 606 LCSPNLKPLPPCSRSKPITLYLIGVLAIFTLILLLGSLFWFLKTRSKIFGDKPNRQWKTT 665

Query: 95  SFHRL 81
            F  +
Sbjct: 666 IFQSI 670


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