BLASTX nr result

ID: Coptis25_contig00038021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038021
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267...   263   2e-68
emb|CBI15293.3| unnamed protein product [Vitis vinifera]              263   2e-68
ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802...   228   6e-58
ref|XP_003622400.1| RING finger and CHY zinc finger domain-conta...   228   8e-58
ref|XP_002893023.1| F14D16.3 [Arabidopsis lyrata subsp. lyrata] ...   224   9e-57

>ref|XP_002266572.2| PREDICTED: uncharacterized protein LOC100267228 [Vitis vinifera]
          Length = 1288

 Score =  263 bits (672), Expect = 2e-68
 Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 1/225 (0%)
 Frame = +1

Query: 1   PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGE-ILDIRNRFEFLKLVYRYHCAAE 177
           PILLFV FHKA  AEL E+ R  +++S     + +G  +++IR RFEFLKL Y+YH AAE
Sbjct: 46  PILLFVFFHKALRAELAELRRLAAAESGCRGGSSNGNLVVEIRRRFEFLKLFYKYHSAAE 105

Query: 178 DEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELVYTTAT 357
           DE++F ALDVH+ NVA TYSLEH+ IDDLF S+F CL +L++ D N++  +QELV   +T
Sbjct: 106 DEVIFLALDVHIKNVAHTYSLEHKSIDDLFSSIFHCLDVLMEGDANTAKPFQELVLLIST 165

Query: 358 LQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSYLPKDE 537
           +Q TI  HMLKEEEQVFPLL++QFS +EQASLVWQF CSVP++LLE+ LPWMTS+L  +E
Sbjct: 166 IQTTICHHMLKEEEQVFPLLMKQFSPQEQASLVWQFMCSVPVLLLEDFLPWMTSFLSPEE 225

Query: 538 QADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAAMS 672
           Q +V++CIKEVVP+E+LL+ V+ SWLG      G  +   + A S
Sbjct: 226 QVNVVNCIKEVVPEEKLLEEVVISWLGNNNQPFGSPTRIGEEAQS 270



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
 Frame = +1

Query: 1    PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIRNRFEFLKLVYRYHCAAED 180
            P+ L   FHKA   +L  +   +   +    +TG+  + D   RF  ++ +Y+ H  AED
Sbjct: 636  PVDLIFFFHKALKKDLEFL---VFGSAKLAENTGY--LADFHRRFRLIRFLYQIHSDAED 690

Query: 181  EIVFRALDVHVS--NVACTYSLEHRGIDDLFDSVFQCLILLLDNDGN-----SSMHYQEL 339
            EI F AL+      N++ +Y+++H+    L    F  L  +LD         S +H+ ++
Sbjct: 691  EIAFPALEAKGKGQNISHSYTIDHK----LEVEHFNKLSFILDEMSKLHISVSGVHFDKM 746

Query: 340  VYTTA--------------TLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSV 477
                               +LQ  +  H+  EE +++PL  + FS KEQ  ++      +
Sbjct: 747  DQRMLKYHQLCMKLHDMCQSLQKILCDHVNHEEIELWPLFRECFSNKEQEKIIGSILGRM 806

Query: 478  PIILLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESWLG 618
               +L+ I+PW+ + L   EQ  ++   ++          + E WLG
Sbjct: 807  RAEILQEIIPWLMASLTPKEQHAMMSLWRKATKNT-----MFEEWLG 848


>emb|CBI15293.3| unnamed protein product [Vitis vinifera]
          Length = 601

 Score =  263 bits (672), Expect = 2e-68
 Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 1/225 (0%)
 Frame = +1

Query: 1   PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGE-ILDIRNRFEFLKLVYRYHCAAE 177
           PILLFV FHKA  AEL E+ R  +++S     + +G  +++IR RFEFLKL Y+YH AAE
Sbjct: 46  PILLFVFFHKALRAELAELRRLAAAESGCRGGSSNGNLVVEIRRRFEFLKLFYKYHSAAE 105

Query: 178 DEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELVYTTAT 357
           DE++F ALDVH+ NVA TYSLEH+ IDDLF S+F CL +L++ D N++  +QELV   +T
Sbjct: 106 DEVIFLALDVHIKNVAHTYSLEHKSIDDLFSSIFHCLDVLMEGDANTAKPFQELVLLIST 165

Query: 358 LQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSYLPKDE 537
           +Q TI  HMLKEEEQVFPLL++QFS +EQASLVWQF CSVP++LLE+ LPWMTS+L  +E
Sbjct: 166 IQTTICHHMLKEEEQVFPLLMKQFSPQEQASLVWQFMCSVPVLLLEDFLPWMTSFLSPEE 225

Query: 538 QADVLHCIKEVVPKEELLQGVLESWLGRQTSLIGLSSTQNKAAMS 672
           Q +V++CIKEVVP+E+LL+ V+ SWLG      G  +   + A S
Sbjct: 226 QVNVVNCIKEVVPEEKLLEEVVISWLGNNNQPFGSPTRIGEEAQS 270


>ref|XP_003550768.1| PREDICTED: uncharacterized protein LOC100802706 [Glycine max]
          Length = 1262

 Score =  228 bits (582), Expect = 6e-58
 Identities = 116/207 (56%), Positives = 144/207 (69%), Gaps = 2/207 (0%)
 Frame = +1

Query: 1   PILLFVSFHKAFHAELGEIYRYISSDSF--DVSSTGHGEILDIRNRFEFLKLVYRYHCAA 174
           PILLFV FHKAF +EL  + R   + S   D        +L ++ RF+FLKL ++YHCAA
Sbjct: 32  PILLFVCFHKAFRSELDHLRRLAETASSLEDEPRRCRQIVLQLQRRFQFLKLAHKYHCAA 91

Query: 175 EDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELVYTTA 354
           EDE++F ALD HV NV CTYSLEHR  + LF SVF  L  L+    N S  +QELVY   
Sbjct: 92  EDEVIFLALDTHVKNVICTYSLEHRSTNGLFGSVFHFLDELMVPKENISKLFQELVYCIG 151

Query: 355 TLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSYLPKD 534
            LQ +I QHMLKEEEQVFPLL+Q+ S KEQASLVWQF CSVPI+LLE +LPWM S+L  +
Sbjct: 152 ILQTSIYQHMLKEEEQVFPLLIQKLSNKEQASLVWQFICSVPIMLLEEVLPWMVSFLSAN 211

Query: 535 EQADVLHCIKEVVPKEELLQGVLESWL 615
           +Q++V  C+ E+ P E+ +Q VL SWL
Sbjct: 212 KQSEVTQCLNEIAPMEKAMQEVLVSWL 238



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
 Frame = +1

Query: 1    PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIRNRFEFLKLVYRYHCAAED 180
            PI L   FHKA   +L   Y  + S   + +      ++D   RF  +  +++ H  AED
Sbjct: 611  PIDLIFFFHKAIKKDLE--YLVLGSTQLEKNDK---LLMDFHKRFHLIYFLHQIHSDAED 665

Query: 181  EIVFRALDVH--VSNVACTYSLEHRGIDDLFDSVFQCLILL-------------LDNDGN 315
            EIVF A++    + N++  Y+ +H+   D F+ +   L  +             +   G 
Sbjct: 666  EIVFPAMEARGKLKNISHAYTFDHKHEVDHFNKISHILDKMSGLHLSVSTIDPNVKEKGI 725

Query: 316  SSMHY--QELVYTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIIL 489
               H+  ++L     ++  ++S H+ +EE +++P++ + FS  EQ  ++      +   +
Sbjct: 726  LRYHHLCRKLQEMCKSMHKSLSDHINREEIEIWPIIRKFFSNHEQGRIIGCMLGRIRAEI 785

Query: 490  LENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESW 612
            L++++PW+ + L ++EQ  VL  +  +  K  +    L  W
Sbjct: 786  LQDMIPWLMASLTQEEQ-HVLMFLWSMATKNTMFDEWLGEW 825


>ref|XP_003622400.1| RING finger and CHY zinc finger domain-containing protein [Medicago
           truncatula] gi|355497415|gb|AES78618.1| RING finger and
           CHY zinc finger domain-containing protein [Medicago
           truncatula]
          Length = 1225

 Score =  228 bits (581), Expect = 8e-58
 Identities = 114/212 (53%), Positives = 145/212 (68%), Gaps = 6/212 (2%)
 Frame = +1

Query: 1   PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGE------ILDIRNRFEFLKLVYRY 162
           PILLFV FH+A  +EL ++  +  +     SS  H        +  +++RF+FLKL ++Y
Sbjct: 38  PILLFVCFHQALRSELDQLRPFAET----ASSLEHDPNRCREIVFKLQHRFQFLKLAFKY 93

Query: 163 HCAAEDEIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELV 342
           HCAAEDEI+F ALD+HV NV CTYSLEH   + LFDS+   L  L+ +  N S  ++ELV
Sbjct: 94  HCAAEDEIIFHALDIHVKNVVCTYSLEHNSTNGLFDSILHFLDELMGSSENISKLFRELV 153

Query: 343 YTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSY 522
           Y    LQ ++ QHMLKEEEQVFPLL+Q+ S KEQASLVWQF CSVPI+LLE +LPWM S+
Sbjct: 154 YCIDILQTSVYQHMLKEEEQVFPLLIQKLSTKEQASLVWQFICSVPIMLLEEVLPWMVSF 213

Query: 523 LPKDEQADVLHCIKEVVPKEELLQGVLESWLG 618
           L  D+QA+V  C  E+ P E  LQ VL SWLG
Sbjct: 214 LSADKQAEVTRCFNEIAPMETTLQEVLVSWLG 245



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 52/222 (23%), Positives = 107/222 (48%), Gaps = 18/222 (8%)
 Frame = +1

Query: 1    PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEIL-DIRNRFEFLKLVYRYHCAAE 177
            PI L   FHKA   +L     Y+   S  +   GH +++ D + RF  +  +++ H  AE
Sbjct: 620  PIDLIFFFHKAIKKDLD----YLVHGSAQLE--GHDDLVTDFQKRFNLIYFLHQIHSDAE 673

Query: 178  DEIVFRALDV--HVSNVACTYSLEHRG-------IDDLFDSVFQCLILLLDNDGNSS--- 321
            +EIVF AL+    + N++  Y+ +H+        +  + D + +  +L+   D       
Sbjct: 674  EEIVFPALEAIGQLKNISHAYTFDHKHEVEHFGKMSRILDKISELHLLVSTTDSKIRDKR 733

Query: 322  ---MHY--QELVYTTATLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPII 486
                H+  ++L     ++   +S H+ +EE +++P++ + FS +EQ  ++      +   
Sbjct: 734  VLRRHHLIRKLQERCKSMHKLLSDHINREEIEIWPIIREFFSNREQGKIIGCILGRISAE 793

Query: 487  LLENILPWMTSYLPKDEQADVLHCIKEVVPKEELLQGVLESW 612
            +L++++PW+ + L ++EQ  VL  +  +  K  +    L  W
Sbjct: 794  ILQDMIPWLMASLTQEEQ-HVLMFLWSMATKNTMFDEWLGEW 834


>ref|XP_002893023.1| F14D16.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297338865|gb|EFH69282.1| F14D16.3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1260

 Score =  224 bits (572), Expect = 9e-57
 Identities = 111/205 (54%), Positives = 149/205 (72%)
 Frame = +1

Query: 1   PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIRNRFEFLKLVYRYHCAAED 180
           PILLFV FHKAF A+L E++ +++ D+     +G    +++R +F+FLKLVY+YH AAED
Sbjct: 43  PILLFVYFHKAFRAQLAELH-FLAGDTV---RSGSDLAVELRYKFDFLKLVYKYHSAAED 98

Query: 181 EIVFRALDVHVSNVACTYSLEHRGIDDLFDSVFQCLILLLDNDGNSSMHYQELVYTTATL 360
           E++F ALD  V N+   YSLEH   DDLF SVF  L +L +  GN +   +E+V    T+
Sbjct: 99  EVIFSALDTRVKNIVFNYSLEHDATDDLFTSVFHWLNVLEEEKGNRAHVLREVVLCIGTI 158

Query: 361 QATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENILPWMTSYLPKDEQ 540
           Q++I QHMLKEE QVFPL+++ FSF+EQASLVWQF CSVP+++LE I PWMTS L   E+
Sbjct: 159 QSSICQHMLKEERQVFPLMIENFSFEEQASLVWQFICSVPVMVLEEIFPWMTSLLSPKEK 218

Query: 541 ADVLHCIKEVVPKEELLQGVLESWL 615
           ++V +C+KEVVPKE  LQ V+ SWL
Sbjct: 219 SEVENCVKEVVPKEVTLQLVINSWL 243



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
 Frame = +1

Query: 1    PILLFVSFHKAFHAELGEIYRYISSDSFDVSSTGHGEILDIRNRFEFLKLVYRYHCAAED 180
            PI L   FHKA   +L  +    +  + D S  G     +   RF  +K +Y+ H  AED
Sbjct: 617  PIDLIFFFHKAMKKDLDYLVCGSARLATDCSFLG-----EFHQRFHLIKFLYQIHSDAED 671

Query: 181  EIVFRALDVH--VSNVACTYSLEHR-------GIDDLFDSVFQCLILLLDNDGNSSMHYQ 333
            EI F AL+    + N++ +YS++H         +  L + + +  +L+LD+    ++ Y+
Sbjct: 672  EIAFPALEAKGKLQNISQSYSIDHELEVEHLDKVSFLLNEMAELNMLVLDH---KNVKYE 728

Query: 334  ELVYTTA----TLQATISQHMLKEEEQVFPLLVQQFSFKEQASLVWQFFCSVPIILLENI 501
            +L  +      ++   +S+H+ +EE +++ L    F+  EQ  ++      +   +L+++
Sbjct: 729  KLCMSLQDICKSIHKLLSEHLHREETELWCLFRDCFTIAEQEKIIASMLGRISGEILQDM 788

Query: 502  LPWMTSYLPKDEQADVLHCIKEVVPK 579
            +PW+   L  DEQ  V+   ++   K
Sbjct: 789  IPWLMESLIPDEQHAVMSLWRQATRK 814


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