BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00038014
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523781.1| pentatricopeptide repeat-containing protein,...    57   2e-06

>ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536869|gb|EEF38507.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 661

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
 Frame = +2

Query: 86  KPDPINPDIITTVLLDFL-------NVDEPSNAPQ------PFDEIPQGNLPMCYYSLLL 226
           KP PI    + T    FL       N+ +P   P+       FD  P+ ++  C + LL 
Sbjct: 13  KPQPIQ--FLKTTRTQFLQSHATAVNLGKPLQEPKCSIAQNVFDRSPKQDVVQCNH-LLF 69

Query: 227 EHSRNNLHHKVLDVFSKIHQSDGFIDGSGLTCVLK 331
           ++SRNN HH+V+++F  IH+SD   DGS L+CVLK
Sbjct: 70  DYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLK 104