BLASTX nr result

ID: Coptis25_contig00037992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037992
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526853.1| microsomal signal peptidase 25 kD subunit, p...   114   1e-23
gb|AAB95281.1| unknown protein [Arabidopsis thaliana]                 113   1e-23
ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis...   113   1e-23
ref|XP_003633468.1| PREDICTED: probable signal peptidase complex...   112   2e-23
ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   112   2e-23

>ref|XP_002526853.1| microsomal signal peptidase 25 kD subunit, putative [Ricinus
           communis] gi|223533752|gb|EEF35484.1| microsomal signal
           peptidase 25 kD subunit, putative [Ricinus communis]
          Length = 173

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/74 (74%), Positives = 67/74 (90%)
 Frame = +1

Query: 19  SKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQFYP 198
           +KN K+ANL D +SIKH+LDESVSEI+ SRG+ EDV+MSNVRLL+GTIIII+ALVAQFY 
Sbjct: 3   NKNPKKANLLDHHSIKHILDESVSEIVTSRGYVEDVRMSNVRLLMGTIIIIIALVAQFYK 62

Query: 199 KKFPESKNFLISCI 240
           KKFPE+++FLI CI
Sbjct: 63  KKFPENRDFLIGCI 76


>gb|AAB95281.1| unknown protein [Arabidopsis thaliana]
          Length = 171

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/76 (69%), Positives = 70/76 (92%)
 Frame = +1

Query: 13  TTSKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQF 192
           +T+KN K+ANL D +SIKH+LDESVS+I+ SRG+KEDV++SN++L+LGTIII+VALVAQF
Sbjct: 8   STNKNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQF 67

Query: 193 YPKKFPESKNFLISCI 240
           Y KKFPE+++FLI CI
Sbjct: 68  YNKKFPENRDFLIGCI 83


>ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis thaliana]
           gi|20140011|sp|P58684.1|SPCS2_ARATH RecName:
           Full=Probable signal peptidase complex subunit 2;
           AltName: Full=Microsomal signal peptidase 25 kDa
           subunit; Short=SPase 25 kDa subunit
           gi|17528956|gb|AAL38688.1| unknown protein [Arabidopsis
           thaliana] gi|20465965|gb|AAM20168.1| unknown protein
           [Arabidopsis thaliana] gi|330254662|gb|AEC09756.1|
           signal peptidase complex subunit 2 [Arabidopsis
           thaliana]
          Length = 192

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/76 (69%), Positives = 70/76 (92%)
 Frame = +1

Query: 13  TTSKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQF 192
           +T+KN K+ANL D +SIKH+LDESVS+I+ SRG+KEDV++SN++L+LGTIII+VALVAQF
Sbjct: 8   STNKNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQF 67

Query: 193 YPKKFPESKNFLISCI 240
           Y KKFPE+++FLI CI
Sbjct: 68  YNKKFPENRDFLIGCI 83


>ref|XP_003633468.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 3
           [Vitis vinifera]
          Length = 186

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/75 (72%), Positives = 68/75 (90%)
 Frame = +1

Query: 16  TSKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQFY 195
           ++KN K+ANL D +SIKH+LDE VSEI+ SRG+ EDV+MSNVRLL+G+IIII+ALVAQFY
Sbjct: 8   SNKNPKKANLLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIIIALVAQFY 67

Query: 196 PKKFPESKNFLISCI 240
           PKKFPE+++FLI CI
Sbjct: 68  PKKFPENRDFLIVCI 82


>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/75 (72%), Positives = 68/75 (90%)
 Frame = +1

Query: 16  TSKNSKRANLNDQNSIKHLLDESVSEILMSRGFKEDVKMSNVRLLLGTIIIIVALVAQFY 195
           ++KN K+ANL D +SIKH+LDE VSEI+ SRG+ EDV+MSNVRLL+G+IIII+ALVAQFY
Sbjct: 8   SNKNPKKANLLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIIIALVAQFY 67

Query: 196 PKKFPESKNFLISCI 240
           PKKFPE+++FLI CI
Sbjct: 68  PKKFPENRDFLIVCI 82


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