BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037980
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40653.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31

>emb|CBI40653.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/101 (63%), Positives = 83/101 (82%)
 Frame = -2

Query: 303 HDGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCID 124
           +DGV PVVYN+TYLLK CGD ++LR GK +H  L+VNGF+SN++AMT V NMYAKCR ++
Sbjct: 174 YDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVE 233

Query: 123 DCRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           +  KMFDRMP+RD+V WN I++GYAQNG  + AL+LV+ MQ
Sbjct: 234 EAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQ 274



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/87 (33%), Positives = 50/87 (57%)
 Frame = -2

Query: 261 LKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDCRKMFDRMPQRDV 82
           L AC D  ++  G+ +H  L      S++  M ++ +MY+KC+      ++FD M +R V
Sbjct: 368 LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCK------RLFDMMDERHV 421

Query: 81  VAWNAIVAGYAQNGLSRRALKLVIEMQ 1
             WNA++ GY  +GL + AL+L  +M+
Sbjct: 422 TTWNAMIDGYGTHGLGKAALELFEKMK 448


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/101 (63%), Positives = 83/101 (82%)
 Frame = -2

Query: 303 HDGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCID 124
           +DGV PVVYN+TYLLK CGD ++LR GK +H  L+VNGF+SN++AMT V NMYAKCR ++
Sbjct: 168 YDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVE 227

Query: 123 DCRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           +  KMFDRMP+RD+V WN I++GYAQNG  + AL+LV+ MQ
Sbjct: 228 EAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQ 268



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/98 (33%), Positives = 55/98 (56%)
 Frame = -2

Query: 294 VVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDCR 115
           + P  +    ++ A  + S L   K +HG ++      N++  TA+ +MYAKC  +   R
Sbjct: 474 IKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTAR 533

Query: 114 KMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           K+FD M +R V  WNA++ GY  +GL + AL+L  +M+
Sbjct: 534 KLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMK 571



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/99 (35%), Positives = 57/99 (57%)
 Frame = -2

Query: 300 DGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDD 121
           +G  P       +L A  D  +LR+G+ +HG  +  GF S +   TA+ +MY+KC  +  
Sbjct: 270 EGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGT 329

Query: 120 CRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEM 4
            R +FDRM  + VV+WN+++ GY QNG    A+++  +M
Sbjct: 330 ARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKM 368



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/87 (32%), Positives = 51/87 (58%)
 Frame = -2

Query: 261 LKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDCRKMFDRMPQRDV 82
           L AC D  ++  G+ +H  L      S++  M ++ +MY+KC+ +D   ++F+ +  + +
Sbjct: 384 LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTL 443

Query: 81  VAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           V+WNA++ GYAQNG    A+    +MQ
Sbjct: 444 VSWNAMILGYAQNGRINEAIDYFCKMQ 470


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/101 (61%), Positives = 84/101 (83%)
 Frame = -2

Query: 303 HDGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCID 124
           +D V PVVYN+TYLLK CGD ++L+ GK +HG L+ N F++N++AMT V NMYAKCR ID
Sbjct: 140 YDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID 199

Query: 123 DCRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           D  KMFDRMP+RD+V+WN I+AG++QNG +++AL+LV+ MQ
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = -2

Query: 297 GVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDC 118
           G+ P  +    ++ A  + S  R  K +HG ++ +    N++  TA+ +MY+KC  I   
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 117 RKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           RK+FD +  R V+ WNA++ GY  +GL R AL L  +M+
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/99 (34%), Positives = 57/99 (57%)
 Frame = -2

Query: 300 DGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDD 121
           +G  P       +L A  D   L +GK +HG  +  GF+  +   TA+++MY+KC  ++ 
Sbjct: 242 EGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVET 301

Query: 120 CRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEM 4
            R +FD M Q+ VV+WN+++ GY QNG   +A+ +  +M
Sbjct: 302 ARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKM 340



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = -2

Query: 300 DGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDD 121
           +G+ P        L AC D  +L  GK +H  +      S++  M ++ +MY+KC+ +D 
Sbjct: 343 EGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDI 402

Query: 120 CRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
              +F+ +  R  V+WNA++ GYAQNG    AL    EM+
Sbjct: 403 ASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/101 (61%), Positives = 84/101 (83%)
 Frame = -2

Query: 303 HDGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCID 124
           +D V PVVYN+TYLLK CGD ++L+ GK +HG L+ N F++N++AMT V NMYAKCR ID
Sbjct: 140 YDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQID 199

Query: 123 DCRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           D  KMFDRMP+RD+V+WN I+AG++QNG +++AL+LV+ MQ
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = -2

Query: 297 GVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDC 118
           G+ P  +    ++ A  + S  R  K +HG ++ +    N++  TA+ +MY+KC  I   
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 117 RKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           RK+FD +  R V+ WNA++ GY  +GL R AL L  +M+
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMK 543



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/99 (34%), Positives = 57/99 (57%)
 Frame = -2

Query: 300 DGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDD 121
           +G  P       +L A  D   L +GK +HG  +  GF+  +   TA+++MY+KC  ++ 
Sbjct: 242 EGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVET 301

Query: 120 CRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEM 4
            R +FD M Q+ VV+WN+++ GY QNG   +A+ +  +M
Sbjct: 302 ARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKM 340



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = -2

Query: 300 DGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDD 121
           +G+ P        L AC D  +L  GK +H  +      S++  M ++ +MY+KC+ +D 
Sbjct: 343 EGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDI 402

Query: 120 CRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
              +F+ +  R  V+WNA++ GYAQNG    AL    EM+
Sbjct: 403 ASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK 442


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/100 (62%), Positives = 79/100 (79%)
 Frame = -2

Query: 303 HDGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCID 124
           HD V PVVYN+TYLLK CGD S+L+ GK +HG ++ +GFS NL+AMT V NMYAKCR I+
Sbjct: 23  HDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQIN 82

Query: 123 DCRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEM 4
           D   MFDRMP+RD+V WN +++GYAQNG ++ AL LV+ M
Sbjct: 83  DAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRM 122



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/98 (34%), Positives = 56/98 (57%)
 Frame = -2

Query: 294 VVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDCR 115
           + P  +    ++ A  + S  R  K +HG ++      N++ MTA+ +MYAKC  I   R
Sbjct: 329 IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTAR 388

Query: 114 KMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
           K+FD M  R V+ WNA++ GY  +GL + +++L  EM+
Sbjct: 389 KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMK 426



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/100 (34%), Positives = 53/100 (53%)
 Frame = -2

Query: 300 DGVVPVVYNYTYLLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDD 121
           +GV P        L AC D  +L  GK +H  +      S++  M ++ +MY+KC+ +D 
Sbjct: 226 EGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDI 285

Query: 120 CRKMFDRMPQRDVVAWNAIVAGYAQNGLSRRALKLVIEMQ 1
              +F  +  + +V+WNA++ GYAQNG    AL    EMQ
Sbjct: 286 AADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ 325



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = -2

Query: 264 LLKACGDCSNLRMGKLLHGDLVVNGFSSNLYAMTAVSNMYAKCRCIDDCRKMFDRMPQRD 85
           +L A  D   LR+G  +HG ++  GF S +   TA+ +MY+KC  +   R +FD M  R 
Sbjct: 137 ILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRT 196

Query: 84  VVAWNAIVAGYAQNGLSRRALKLVIEM 4
           VV+WN+++ GY Q+G +  A+ +  +M
Sbjct: 197 VVSWNSMIDGYVQSGDAEGAMLIFQKM 223