BLASTX nr result

ID: Coptis25_contig00037977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037977
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270656.1| PREDICTED: uncharacterized protein LOC100257...    56   3e-06
ref|XP_002324553.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002270656.1| PREDICTED: uncharacterized protein LOC100257638 [Vitis vinifera]
          Length = 377

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
 Frame = -1

Query: 394 QACANHYIREGSISHIGNLGPADE--PFANGSVI--VTREMHNGFFLHRVGLLEIVSYFI 227
           + C++ Y R+ SI++I N G  DE  P A+ + I   ++ M NGF LHRV  LEI +YF+
Sbjct: 218 EGCSD-YARKDSIAYIRNPGSIDEKLPLASVNQISGFSKGMVNGFLLHRVSSLEIETYFV 276

Query: 226 NPASVVMSRSILQQQGKEFM 167
           N A  V+   +LQQ+GK  M
Sbjct: 277 NSAGEVVHDVVLQQRGKAAM 296


>ref|XP_002324553.1| predicted protein [Populus trichocarpa] gi|222865987|gb|EEF03118.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = -1

Query: 394 QACANHYIREGSISHIGNLGPA-DEPFAN--GSVIVTREMHN-GFFLHRVGLLEIVSYFI 227
           Q C +  + +G ++HIG   P   EP  N  G + + +E+ N GF LHRV  LEI +YF+
Sbjct: 180 QGCTSRTV-QGGVAHIGIADPTGSEPLVNLNGRLAIQKEVINDGFLLHRVSSLEITTYFV 238

Query: 226 NPASVVMSRSILQQQGKE 173
           + A  +++ +++ Q GKE
Sbjct: 239 SSAGEIVNEAVITQHGKE 256


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