BLASTX nr result
ID: Coptis25_contig00037964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00037964
(637 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA... 182 3e-54
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase... 173 1e-52
ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase... 168 1e-51
ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group] g... 172 2e-51
emb|CBI40096.3| unnamed protein product [Vitis vinifera] 166 3e-51
>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
communis] gi|223529101|gb|EEF31082.1| tRNA-specific
adenosine deaminase subunit TAD2, putative [Ricinus
communis]
Length = 223
Score = 182 bits (463), Expect(2) = 3e-54
Identities = 85/128 (66%), Positives = 97/128 (75%)
Frame = -1
Query: 388 RHAEMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGC 209
RHAEMEAID LL+ WQ+ GLS E+ KFS+C LYVTCEPCIMCA+ALSI+GI VYYGC
Sbjct: 91 RHAEMEAIDVLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGC 150
Query: 208 ANDRFGGCGXXXXXXXXXXXXXXXXXXSQGKSFKCTGGIMAAEAISLLRSFYEQGNPNAP 29
AND+FGGCG +QGK FKCTGGIMA+EA+SLLR FYEQGNPNAP
Sbjct: 151 ANDKFGGCGSILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAP 210
Query: 28 KPHRPLQI 5
KPHRP+ +
Sbjct: 211 KPHRPVNL 218
Score = 55.5 bits (132), Expect(2) = 3e-54
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = -2
Query: 618 SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASG 499
S+ T A+ME A++QA+ ALD+ EVP+GCV VED KVIASG
Sbjct: 40 SSETFAYMELALEQARHALDSLEVPVGCVIVEDGKVIASG 79
>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
sativus]
Length = 191
Score = 173 bits (439), Expect(2) = 1e-52
Identities = 83/126 (65%), Positives = 92/126 (73%)
Frame = -1
Query: 388 RHAEMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGC 209
RHAEMEAID L++ WQ GLS E+ KFS+C LYVTCEPCIMCASALSIIGI+ VYYGC
Sbjct: 60 RHAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGC 119
Query: 208 ANDRFGGCGXXXXXXXXXXXXXXXXXXSQGKSFKCTGGIMAAEAISLLRSFYEQGNPNAP 29
AND+FGGCG G+ FKCT GIMA+EA+ L RSFYEQGNPNAP
Sbjct: 120 ANDKFGGCGSILSLHLGSGEAPTSGNGL-GRGFKCTAGIMASEAVGLFRSFYEQGNPNAP 178
Query: 28 KPHRPL 11
KPHRPL
Sbjct: 179 KPHRPL 184
Score = 58.9 bits (141), Expect(2) = 1e-52
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = -2
Query: 636 SCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASG 499
S E+ S+ TL FME A+QQAKLAL+N EVP+GCV VED VIA+G
Sbjct: 3 SSVEDCSSDTLRFMELAIQQAKLALNNLEVPVGCVIVEDGMVIATG 48
>ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase 2 [Glycine max]
Length = 182
Score = 168 bits (425), Expect(2) = 1e-51
Identities = 81/126 (64%), Positives = 91/126 (72%)
Frame = -1
Query: 388 RHAEMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGC 209
RHAEMEAID LL WQ+ GLS E+ KFS C LYVTCEPCIMCASALSI+GI+ V+YGC
Sbjct: 54 RHAEMEAIDVLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGC 113
Query: 208 ANDRFGGCGXXXXXXXXXXXXXXXXXXSQGKSFKCTGGIMAAEAISLLRSFYEQGNPNAP 29
+ND+FGGCG GK FKCTG IMA+EA+ L R+FYEQGNPNAP
Sbjct: 114 SNDKFGGCG-SILSLHLSNTAPLNNEVPSGKCFKCTGRIMASEAVLLFRTFYEQGNPNAP 172
Query: 28 KPHRPL 11
KPHRPL
Sbjct: 173 KPHRPL 178
Score = 61.2 bits (147), Expect(2) = 1e-51
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -2
Query: 618 SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASG 499
S+ TLAFME A+QQAKLALD EVP+GCV VED KVIASG
Sbjct: 3 SSETLAFMELAIQQAKLALDVLEVPVGCVIVEDGKVIASG 42
>ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group]
gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate
deaminase zinc-binding region family protein, expressed
[Oryza sativa Japonica Group]
gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa
Japonica Group] gi|218192723|gb|EEC75150.1| hypothetical
protein OsI_11352 [Oryza sativa Indica Group]
Length = 183
Score = 172 bits (437), Expect(2) = 2e-51
Identities = 80/129 (62%), Positives = 94/129 (72%)
Frame = -1
Query: 388 RHAEMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGC 209
RHAEMEAID LL+ WQ GL ++ KF+RCDLYVTCEPCIMCA ALSI+GIR VY+GC
Sbjct: 53 RHAEMEAIDILLREWQGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGC 112
Query: 208 ANDRFGGCGXXXXXXXXXXXXXXXXXXSQGKSFKCTGGIMAAEAISLLRSFYEQGNPNAP 29
AND+FGGCG K +KCTGGIMA EA++L R+FYEQGNPNAP
Sbjct: 113 ANDKFGGCGSIMSLHQSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQGNPNAP 172
Query: 28 KPHRPLQIS 2
KPHRP++I+
Sbjct: 173 KPHRPVRIA 181
Score = 56.2 bits (134), Expect(2) = 2e-51
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -2
Query: 618 SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASG 499
+A FME A++QAK ALDN EVP+GCV VED KVI+SG
Sbjct: 2 AAAAAEFMELALEQAKFALDNLEVPVGCVIVEDGKVISSG 41
>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 166 bits (421), Expect(2) = 3e-51
Identities = 79/124 (63%), Positives = 92/124 (74%)
Frame = -1
Query: 388 RHAEMEAIDGLLKNWQESGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGC 209
RHAEMEAID LL+ WQ++GLS +E+ FS+C LYVTCEPCIMCA++LSI+GI+ VYYGC
Sbjct: 75 RHAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGC 134
Query: 208 ANDRFGGCGXXXXXXXXXXXXXXXXXXSQGKSFKCTGGIMAAEAISLLRSFYEQGNPNAP 29
AND+FGGCG K FKCTGGIMA EA+SLL+ FYEQGNPNAP
Sbjct: 135 ANDKFGGCGSILSLHSSSSKLLTSGTPLV-KGFKCTGGIMATEAVSLLQRFYEQGNPNAP 193
Query: 28 KPHR 17
KPHR
Sbjct: 194 KPHR 197
Score = 61.6 bits (148), Expect(2) = 3e-51
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -2
Query: 636 SCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASG 499
S EE+ TLAFME A+QQAKLALD+ EVP+GCV VED K+IA+G
Sbjct: 18 SLGEENLPGTLAFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATG 63