BLASTX nr result

ID: Coptis25_contig00037963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037963
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330423.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003541859.1| PREDICTED: myosin-J heavy chain-like [Glycin...    75   7e-12
ref|NP_568806.3| myosin 2 [Arabidopsis thaliana] gi|332009095|gb...    74   1e-11
dbj|BAB10751.1| myosin heavy chain [Arabidopsis thaliana]              74   1e-11
ref|NP_001078755.1| myosin 2 [Arabidopsis thaliana] gi|332009096...    74   1e-11

>ref|XP_002330423.1| predicted protein [Populus trichocarpa] gi|222871808|gb|EEF08939.1|
            predicted protein [Populus trichocarpa]
          Length = 1016

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 59/136 (43%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
 Frame = -1

Query: 445  KKHIARRTLA--DRQKAVTYLQSATRGWLIRR---NIYKMKK--HDNSNSDNRKFGKEPN 287
            KK  AR  +A  ++  A  YLQS  RGWL R+   N++KMK   H+NSNS  RK GK+  
Sbjct: 732  KKCTARAPIAMDEQLVAAVYLQSVIRGWLARKHFNNMHKMKWLIHENSNS-KRKPGKK-- 788

Query: 286  ISGLKKXXXXXXXXXXXXXXL-QMRVLKAEAALGQKEEENSLLQQRVKQLETRWXXXXXX 110
            IS +K                 Q RV+KAEA +GQKEEEN+ LQ++++Q E RW      
Sbjct: 789  ISEVKVIPQEQIDIQTSILAELQKRVVKAEATIGQKEEENAALQEQLQQYEKRWSDYEAK 848

Query: 109  XXXXXETWQKQMTSLQ 62
                 E WQ QM SLQ
Sbjct: 849  MKAMEEMWQMQMLSLQ 864


>ref|XP_003541859.1| PREDICTED: myosin-J heavy chain-like [Glycine max]
          Length = 1196

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/120 (39%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
 Frame = -1

Query: 406  KAVTYLQSATRGWLIRRN---IYKMKKH-DNSNSDNRKFGKEPNISGLKKXXXXXXXXXX 239
            +A T LQS  RGWL+RR+   ++K KK  +N+ S  R   K P +  +            
Sbjct: 922  QAATTLQSVIRGWLVRRHASGLHKSKKSPENARSRRRSRVKMPEVKDVSSERGQNLPSAL 981

Query: 238  XXXXLQMRVLKAEAALGQKEEENSLLQQRVKQLETRWXXXXXXXXXXXETWQKQMTSLQV 59
                 Q RV+KAEA + QKEEEN+ L++++KQ E RW           E WQKQM+SLQ+
Sbjct: 982  AEL--QRRVIKAEATIEQKEEENAELKEQLKQFERRWIEYEKRMKSMEEMWQKQMSSLQM 1039


>ref|NP_568806.3| myosin 2 [Arabidopsis thaliana] gi|332009095|gb|AED96478.1| myosin 2
            [Arabidopsis thaliana]
          Length = 1030

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
 Frame = -1

Query: 415  DRQKAVTYLQSATRGWLIRRNIYKMKKHDN----SNSDNRKFGKEPNISGLKKXXXXXXX 248
            D   AV +LQSA RGWL R++   M++       +    RK G+   IS  K        
Sbjct: 751  DELSAVIHLQSAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRR--ISEDKDIPLEQPQ 808

Query: 247  XXXXXXXL-QMRVLKAEAALGQKEEENSLLQQRVKQLETRWXXXXXXXXXXXETWQKQMT 71
                     Q R+LK+EAAL QKEEEN+ L+++++Q E RW           ETWQKQM+
Sbjct: 809  VQPTSMSDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMS 868

Query: 70   SLQV 59
            SLQ+
Sbjct: 869  SLQM 872


>dbj|BAB10751.1| myosin heavy chain [Arabidopsis thaliana]
          Length = 1111

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
 Frame = -1

Query: 415  DRQKAVTYLQSATRGWLIRRNIYKMKKHDN----SNSDNRKFGKEPNISGLKKXXXXXXX 248
            D   AV +LQSA RGWL R++   M++       +    RK G+   IS  K        
Sbjct: 832  DELSAVIHLQSAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRR--ISEDKDIPLEQPQ 889

Query: 247  XXXXXXXL-QMRVLKAEAALGQKEEENSLLQQRVKQLETRWXXXXXXXXXXXETWQKQMT 71
                     Q R+LK+EAAL QKEEEN+ L+++++Q E RW           ETWQKQM+
Sbjct: 890  VQPTSMSDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMS 949

Query: 70   SLQV 59
            SLQ+
Sbjct: 950  SLQM 953


>ref|NP_001078755.1| myosin 2 [Arabidopsis thaliana] gi|332009096|gb|AED96479.1| myosin 2
            [Arabidopsis thaliana]
          Length = 1220

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
 Frame = -1

Query: 415  DRQKAVTYLQSATRGWLIRRNIYKMKKHDN----SNSDNRKFGKEPNISGLKKXXXXXXX 248
            D   AV +LQSA RGWL R++   M++       +    RK G+   IS  K        
Sbjct: 941  DELSAVIHLQSAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRR--ISEDKDIPLEQPQ 998

Query: 247  XXXXXXXL-QMRVLKAEAALGQKEEENSLLQQRVKQLETRWXXXXXXXXXXXETWQKQMT 71
                     Q R+LK+EAAL QKEEEN+ L+++++Q E RW           ETWQKQM+
Sbjct: 999  VQPTSMSDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMS 1058

Query: 70   SLQV 59
            SLQ+
Sbjct: 1059 SLQM 1062


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