BLASTX nr result

ID: Coptis25_contig00037954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037954
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235341.1| dehydration-responsive element binding prote...   131   6e-29
ref|NP_196720.1| dehydration-responsive element-binding protein ...   127   9e-28
ref|XP_003549925.1| PREDICTED: ethylene-responsive transcription...   126   2e-27
ref|XP_004162335.1| PREDICTED: ethylene-responsive transcription...   126   2e-27
ref|XP_002301249.1| AP2/ERF domain-containing transcription fact...   125   3e-27

>ref|NP_001235341.1| dehydration-responsive element binding protein 6 [Glycine max]
           gi|146552062|gb|ABQ42205.1| dehydration-responsive
           element binding protein 6 [Glycine max]
          Length = 230

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/96 (66%), Positives = 73/96 (76%), Gaps = 6/96 (6%)
 Frame = -3

Query: 272 SATKKLKTQGKGAARDVEDAEKNTK------NGKETKHPTYRGVRMRSWGKWVSEIREPR 111
           S++  + T    ++  +E+A   TK      N  E KHPTYRGVRMR WGKWVSEIREPR
Sbjct: 19  SSSFTITTPSTSSSSSIEEATNTTKEKKKKANSNEGKHPTYRGVRMRQWGKWVSEIREPR 78

Query: 110 KKSRIWLGTFPTPEMAARAHDVAALTIKGPSAHLNF 3
           KKSRIWLGTFPTP+MAARAHDVAALTIKG SA+LNF
Sbjct: 79  KKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNF 114


>ref|NP_196720.1| dehydration-responsive element-binding protein 3 [Arabidopsis
           thaliana] gi|75264381|sp|Q9LYD3.1|DREB3_ARATH RecName:
           Full=Dehydration-responsive element-binding protein 3;
           AltName: Full=Protein TINY 2 gi|7573416|emb|CAB87719.1|
           transcription factor like protein [Arabidopsis thaliana]
           gi|48479294|gb|AAT44918.1| putative AP2/EREBP
           transcription factor [Arabidopsis thaliana]
           gi|61104875|gb|AAX38232.1| DREB3 [Arabidopsis thaliana]
           gi|332004315|gb|AED91698.1| dehydration-responsive
           element-binding protein 3 [Arabidopsis thaliana]
          Length = 236

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/74 (81%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 EDAEKNTKNGKET-KHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDV 45
           E +EK TK G+++ KHP YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDV
Sbjct: 33  EQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDV 92

Query: 44  AALTIKGPSAHLNF 3
           AAL+IKG +A LNF
Sbjct: 93  AALSIKGTAAILNF 106


>ref|XP_003549925.1| PREDICTED: ethylene-responsive transcription factor ERF034-like
           [Glycine max]
          Length = 232

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/99 (63%), Positives = 72/99 (72%), Gaps = 9/99 (9%)
 Frame = -3

Query: 272 SATKKLKTQGKGAARDVEDAEKNTKNGK---------ETKHPTYRGVRMRSWGKWVSEIR 120
           S++  + T    ++  +E+A   T   K         E KHPTYRGVRMR WGKWVSEIR
Sbjct: 19  SSSFTITTPSTSSSSSIEEATNTTTKEKKKKRAISNIEGKHPTYRGVRMRQWGKWVSEIR 78

Query: 119 EPRKKSRIWLGTFPTPEMAARAHDVAALTIKGPSAHLNF 3
           EPRKKSRIWLGTFPTP+MAARAHDVAALTIKG SA+LNF
Sbjct: 79  EPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNF 117


>ref|XP_004162335.1| PREDICTED: ethylene-responsive transcription factor ERF034-like
           [Cucumis sativus]
          Length = 214

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 5/91 (5%)
 Frame = -3

Query: 260 KLKTQGKGAARDVED-----AEKNTKNGKETKHPTYRGVRMRSWGKWVSEIREPRKKSRI 96
           +L +Q   ++ D+++     A K  K G + KHPTYRGVRMR WGKWVSEIREP+KKSRI
Sbjct: 9   QLHSQSSSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQWGKWVSEIREPKKKSRI 68

Query: 95  WLGTFPTPEMAARAHDVAALTIKGPSAHLNF 3
           WLGTF TPEMAARAHDVAA TIKG SA+LNF
Sbjct: 69  WLGTFSTPEMAARAHDVAAKTIKGHSAYLNF 99


>ref|XP_002301249.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372085|gb|ABQ62974.1| TINY-like
           protein [Populus trichocarpa]
           gi|222842975|gb|EEE80522.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 272

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/69 (85%), Positives = 62/69 (89%)
 Frame = -3

Query: 209 KNTKNGKETKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALTI 30
           K T+N K  KHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGT+PT EMAARAHDVAAL I
Sbjct: 86  KTTENEKNGKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAI 145

Query: 29  KGPSAHLNF 3
           KG SA+LNF
Sbjct: 146 KGGSAYLNF 154


Top