BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037953
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    70   1e-10
ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncat...    69   3e-10
ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|35551...    69   3e-10

>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
 Frame = +3

Query: 24  EELQLSGDLPSDVLLGILSRLPLKSLSNFRWVCKTWYNIISHPRFAKMHYAHALQNRSPC 203
           EE   +  LP+++ + ILSRLP+++++  + VCK+W +++S P FA++H+A A  +    
Sbjct: 16  EEPSSTPTLPAEIFVDILSRLPVEAMTQCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLF 75

Query: 204 IIFSVDKCKYYLVDHQVFDNHEVSTIPYRLKFNGFFPTPGFR--VIGSANGLLCFASYF- 374
              S +K K Y           ++     +      P   FR  V+GS+NGLLC +    
Sbjct: 76  CHCSGNKTKLYCCHIHSSRGSNINNAMVSMPTKFKLPKNTFRGKVVGSSNGLLCLSEIHR 135

Query: 375 ----YYVCNPIT 398
               +Y+CNPIT
Sbjct: 136 MKKKFYICNPIT 147


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
 Frame = +3

Query: 48  LPSDVLLGILSRLPLKSLSNFRWVCKTWYNIISHPRFAKMHYAHALQNRSPCIIFSVD-- 221
           LP ++ L ILSRLP+  L N + VC+ W +++ HP  A MH++    N  PC++   D  
Sbjct: 26  LPCELALDILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCLLLLCDLP 85

Query: 222 -KCKYYLVDHQVFDNHEVSTIPYRLKFNGFFPTPGFRVIGSANGLLCFASYFY----YVC 386
            K   Y +     D   + T+  R+        P F VIGS NGLL           Y+ 
Sbjct: 86  IKSHLYSLHFSALDETIIETVT-RIPVP---VIPKFLVIGSCNGLLYLLDSLQQRANYIY 141

Query: 387 NPITYD 404
           NP T D
Sbjct: 142 NPFTSD 147


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
 Frame = +3

Query: 21  EEELQLSGD--LPSDVLLGILSRLPLKSLSNFRWVCKTWYNIISHPRFAKMHYAHALQNR 194
           E++ Q +G   LP ++   ILSRLP+ SL  F+ VC+ W  +   P    ++ + + Q  
Sbjct: 17  EDDPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQET 76

Query: 195 SPCIIFSVD---KCKYYLVDHQVFDNHEVSTIPYRLKFNGFFPTPGFRVIGSANGLLCFA 365
            PC+I   D   +   Y VD    +  +      R  F+   P   F V+GS NGLLC +
Sbjct: 77  DPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPE--FEVVGSCNGLLCLS 134

Query: 366 SYFY----YVCNPIT 398
              +    Y+ NP T
Sbjct: 135 DSLFNDSLYIYNPFT 149


>ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355510059|gb|AES91201.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 515

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
 Frame = +3

Query: 33  QLSGDLPSDVLLGILSRLPLKSLSNFRWVCKTWYNIISHPRFAKMHYAHALQNRSPCIIF 212
           +++ D+P ++++ IL RLP++SL  FR VCK W  +IS P+FAK H + +        +F
Sbjct: 31  EITADMPEEIIVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSISTAYPQLVSVF 90

Query: 213 -SVDKCKYYLVDH---QVFDN---HEVSTIPYRLKFNGFFPTPGFRVIGSANGLLCFASY 371
            S+ KC   LV +    + DN   H V    + +       T    +IGS NGLLC + +
Sbjct: 91  VSIAKCN--LVSYPLKPLLDNPSAHRVEPADFEM-----IHTTSMTIIGSCNGLLCLSDF 143

Query: 372 FYY 380
           + +
Sbjct: 144 YQF 146


>ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|355510053|gb|AES91195.1|
           F-box protein [Medicago truncatula]
          Length = 607

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
 Frame = +3

Query: 33  QLSGDLPSDVLLGILSRLPLKSLSNFRWVCKTWYNIISHPRFAKMHYAHALQNRSPCIIF 212
           +++ D+P ++++ IL RLP++SL  FR VCK W  +IS P+FAK H + +        +F
Sbjct: 31  EITADMPEEIIVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSISTAYPQLVSVF 90

Query: 213 -SVDKCKYYLVDH---QVFDN---HEVSTIPYRLKFNGFFPTPGFRVIGSANGLLCFASY 371
            S+ KC   LV +    + DN   H V    + +       T    +IGS NGLLC + +
Sbjct: 91  VSIAKCN--LVSYPLKPLLDNPSAHRVEPADFEM-----IHTTSMTIIGSCNGLLCLSDF 143

Query: 372 FYY 380
           + +
Sbjct: 144 YQF 146