BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037951
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              105   2e-28
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   105   2e-28
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    94   4e-26
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    94   4e-26
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   2e-25

>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  105 bits (261), Expect(2) = 2e-28
 Identities = 51/95 (53%), Positives = 65/95 (68%)
 Frame = -2

Query: 505 YSLIFNGEPLWFFQGKKGLRQGDPMSSYLFVLVMETLNSLLQTGLQRRVFKPHPSCKRTK 326
           YS+ FNGE + FFQGKKG+RQGDPMSS+LFVLVM+ L+  L  G    +F  HP+C    
Sbjct: 675 YSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPI 734

Query: 325 VTHLCFADDVLIFIKGHEDSIWALTLILEDFTRAT 221
           +THL FADDVL+F  G   SI  +  IL+DF + +
Sbjct: 735 ITHLSFADDVLVFSDGAASSIAGILTILDDFRQGS 769



 Score = 45.4 bits (106), Expect(2) = 2e-28
 Identities = 24/74 (32%), Positives = 42/74 (56%)
 Frame = -1

Query: 224 NSLHMNLQKSTILTGGLSHQDGTHLAQILGMQLVSPPVKYLGLPLVSARISIKDCLPLIE 45
           + L +N +K+ +L  G +      LA  LG+   S PV+YLG+PL+S ++  +D  PL++
Sbjct: 769 SGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVD 828

Query: 44  KTTMKVENWKNRTL 3
           +   +  +W  R L
Sbjct: 829 RINSRFTSWTARHL 842


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  105 bits (261), Expect(2) = 2e-28
 Identities = 51/95 (53%), Positives = 65/95 (68%)
 Frame = -2

Query: 505 YSLIFNGEPLWFFQGKKGLRQGDPMSSYLFVLVMETLNSLLQTGLQRRVFKPHPSCKRTK 326
           YS+ FNGE + FFQGKKG+RQGDPMSS+LFVLVM+ L+  L  G    +F  HP+C    
Sbjct: 632 YSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPI 691

Query: 325 VTHLCFADDVLIFIKGHEDSIWALTLILEDFTRAT 221
           +THL FADDVL+F  G   SI  +  IL+DF + +
Sbjct: 692 ITHLSFADDVLVFSDGAASSIAGILTILDDFRQGS 726



 Score = 45.4 bits (106), Expect(2) = 2e-28
 Identities = 24/74 (32%), Positives = 42/74 (56%)
 Frame = -1

Query: 224 NSLHMNLQKSTILTGGLSHQDGTHLAQILGMQLVSPPVKYLGLPLVSARISIKDCLPLIE 45
           + L +N +K+ +L  G +      LA  LG+   S PV+YLG+PL+S ++  +D  PL++
Sbjct: 726 SGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVD 785

Query: 44  KTTMKVENWKNRTL 3
           +   +  +W  R L
Sbjct: 786 RINSRFTSWTARHL 799


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 93.6 bits (231), Expect(2) = 4e-26
 Identities = 47/95 (49%), Positives = 61/95 (64%)
 Frame = -2

Query: 505 YSLIFNGEPLWFFQGKKGLRQGDPMSSYLFVLVMETLNSLLQTGLQRRVFKPHPSCKRTK 326
           YS+ +NGE + FF GKKG+RQGDPMSS+LFVLVM+ L   L  G     F  HP C    
Sbjct: 179 YSIAYNGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPM 238

Query: 325 VTHLCFADDVLIFIKGHEDSIWALTLILEDFTRAT 221
           +THL FADD+L+F  G   S+ A+  IL+ F + +
Sbjct: 239 ITHLSFADDILVFCDGSLSSLVAILDILDVFKKGS 273



 Score = 49.3 bits (116), Expect(2) = 4e-26
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -1

Query: 224 NSLHMNLQKSTILTGGLSHQDGTHLAQILGMQLVSPPVKYLGLPLVSARISIKDCLPLIE 45
           + L +NLQK+ +L  G + +    +A  LG+   S PV+YLG+PL+S ++   D  PL++
Sbjct: 273 SGLGINLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVD 332

Query: 44  KTTMKVENWKNRTL 3
           +   +  +W  R L
Sbjct: 333 RINSRFTSWTARHL 346


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 93.6 bits (231), Expect(2) = 4e-26
 Identities = 47/95 (49%), Positives = 61/95 (64%)
 Frame = -2

Query: 505 YSLIFNGEPLWFFQGKKGLRQGDPMSSYLFVLVMETLNSLLQTGLQRRVFKPHPSCKRTK 326
           YS+ +NGE + FF GKKG+RQGDPMSS+LFVLVM+ L   L  G     F  HP C    
Sbjct: 179 YSIAYNGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPM 238

Query: 325 VTHLCFADDVLIFIKGHEDSIWALTLILEDFTRAT 221
           +THL FADD+L+F  G   S+ A+  IL+ F + +
Sbjct: 239 ITHLSFADDILVFCDGSLSSLVAILDILDVFKKGS 273



 Score = 49.3 bits (116), Expect(2) = 4e-26
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -1

Query: 224 NSLHMNLQKSTILTGGLSHQDGTHLAQILGMQLVSPPVKYLGLPLVSARISIKDCLPLIE 45
           + L +NLQK+ +L  G + +    +A  LG+   S PV+YLG+PL+S ++   D  PL++
Sbjct: 273 SGLGINLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVD 332

Query: 44  KTTMKVENWKNRTL 3
           +   +  +W  R L
Sbjct: 333 RINSRFTSWTARHL 346


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 80.9 bits (198), Expect(2) = 2e-25
 Identities = 40/95 (42%), Positives = 57/95 (60%)
 Frame = -2

Query: 505 YSLIFNGEPLWFFQGKKGLRQGDPMSSYLFVLVMETLNSLLQTGLQRRVFKPHPSCKRTK 326
           YS++ NG P   F  +KGLRQGDP+S +LF L ME L+  +    +   F  HP C+R K
Sbjct: 626 YSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIK 685

Query: 325 VTHLCFADDVLIFIKGHEDSIWALTLILEDFTRAT 221
           +THL FADD+L+F +    SI  +      F++A+
Sbjct: 686 LTHLMFADDLLMFARADASSISKIMAAFNSFSKAS 720



 Score = 59.7 bits (143), Expect(2) = 2e-25
 Identities = 25/70 (35%), Positives = 43/70 (61%)
 Frame = -1

Query: 227 SNSLHMNLQKSTILTGGLSHQDGTHLAQILGMQLVSPPVKYLGLPLVSARISIKDCLPLI 48
           ++ L  +++KS I  GG+ H++   LA  + M + S P +YLG+PL S +++   C PLI
Sbjct: 719 ASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLI 778

Query: 47  EKTTMKVENW 18
           +K T + + W
Sbjct: 779 DKITTRAQGW 788