BLASTX nr result

ID: Coptis25_contig00037927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037927
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 ...   198   4e-49
gb|ACF17663.1| putative long-chain acyl-CoA synthetase [Capsicum...   197   7e-49
ref|XP_002304555.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
emb|CAA64327.1| acyl-CoA synthetase [Brassica napus]                  197   1e-48
ref|NP_194116.1| long chain acyl-CoA synthetase 4 [Arabidopsis t...   196   1e-48

>ref|XP_002270385.1| PREDICTED: long chain acyl-CoA synthetase 4 [Vitis vinifera]
           gi|297742330|emb|CBI34479.3| unnamed protein product
           [Vitis vinifera]
          Length = 662

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/122 (72%), Positives = 106/122 (86%)
 Frame = -1

Query: 368 MADMKYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPEN 189
           MA  +++IEMEK KE+ DG+PS+GPVYRS FA+DGFP+P+EG+ SCWD+FR++ EKYP N
Sbjct: 1   MAQKRFIIEMEKAKEAKDGRPSIGPVYRSSFARDGFPKPIEGMESCWDVFRLAVEKYPGN 60

Query: 188 RMLGRREIVDGKPGKYVWHTYKEVYDLVTKVGKSIRTFGIEKGGRCGIYGANSPEWIMSM 9
           RMLG+REIV+GK GKYVW TYKEVYD V KVG SIR+ G+ +GGRCGIYGANS EWIMSM
Sbjct: 61  RMLGQREIVNGKAGKYVWLTYKEVYDKVMKVGNSIRSCGVNEGGRCGIYGANSAEWIMSM 120

Query: 8   EA 3
           EA
Sbjct: 121 EA 122


>gb|ACF17663.1| putative long-chain acyl-CoA synthetase [Capsicum annuum]
          Length = 658

 Score =  197 bits (501), Expect = 7e-49
 Identities = 88/122 (72%), Positives = 104/122 (85%)
 Frame = -1

Query: 368 MADMKYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPEN 189
           MA  K++IE+E  K + DG+PSMGPVYRS+FAK GFP P+ GL+SCWDIFR+S EKYP N
Sbjct: 1   MATDKFIIEVESAKPAKDGRPSMGPVYRSIFAKHGFPPPIPGLDSCWDIFRMSVEKYPNN 60

Query: 188 RMLGRREIVDGKPGKYVWHTYKEVYDLVTKVGKSIRTFGIEKGGRCGIYGANSPEWIMSM 9
           RMLGRREIVDGKPGKYVW +YKEVYD+V KVG SIR+ G++ G +CGIYGAN PEWI+SM
Sbjct: 61  RMLGRREIVDGKPGKYVWMSYKEVYDIVIKVGNSIRSIGVDVGDKCGIYGANCPEWIISM 120

Query: 8   EA 3
           EA
Sbjct: 121 EA 122


>ref|XP_002304555.1| predicted protein [Populus trichocarpa] gi|222841987|gb|EEE79534.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  197 bits (500), Expect = 1e-48
 Identities = 90/122 (73%), Positives = 103/122 (84%)
 Frame = -1

Query: 368 MADMKYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPEN 189
           MA  KY+IE+EK KE+ DGKPS+GPVYRS+FAKDGFP PV GL SCWD+FR+S EKYP N
Sbjct: 1   MAPRKYLIEVEKAKEAKDGKPSIGPVYRSLFAKDGFPPPVPGLESCWDVFRMSVEKYPNN 60

Query: 188 RMLGRREIVDGKPGKYVWHTYKEVYDLVTKVGKSIRTFGIEKGGRCGIYGANSPEWIMSM 9
            MLGRREIV+GK GKYVW TYK+VYD+V KVG SIR+ G+E G +CGIYGAN  EWIMSM
Sbjct: 61  PMLGRREIVNGKAGKYVWQTYKQVYDVVIKVGNSIRSCGVEPGAKCGIYGANCAEWIMSM 120

Query: 8   EA 3
           EA
Sbjct: 121 EA 122


>emb|CAA64327.1| acyl-CoA synthetase [Brassica napus]
          Length = 667

 Score =  197 bits (500), Expect = 1e-48
 Identities = 83/118 (70%), Positives = 106/118 (89%)
 Frame = -1

Query: 356 KYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPENRMLG 177
           K++ ++E+G+E  DG+PS+GPVYRSVFAKDGFP+P+EG++SCWD+FR+S EKYP N MLG
Sbjct: 7   KFIFQVEEGREGSDGRPSVGPVYRSVFAKDGFPEPIEGMDSCWDVFRMSVEKYPNNPMLG 66

Query: 176 RREIVDGKPGKYVWHTYKEVYDLVTKVGKSIRTFGIEKGGRCGIYGANSPEWIMSMEA 3
           RREIVDGKPGKYVW TY+EVYD+V K+G S+R+ G+E+  +CGIYGANSPEWI+SMEA
Sbjct: 67  RREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSCGVEEQAKCGIYGANSPEWIISMEA 124


>ref|NP_194116.1| long chain acyl-CoA synthetase 4 [Arabidopsis thaliana]
           gi|75213733|sp|Q9T0A0.1|LACS4_ARATH RecName: Full=Long
           chain acyl-CoA synthetase 4
           gi|20805869|gb|AAM28871.1|AF503754_1 long chain acyl-CoA
           synthetase 4 [Arabidopsis thaliana]
           gi|4972089|emb|CAB43885.1| acyl-CoA synthetase-like
           protein [Arabidopsis thaliana]
           gi|7269234|emb|CAB81303.1| acyl-CoA synthetase-like
           protein [Arabidopsis thaliana]
           gi|15146196|gb|AAK83581.1| AT4g23850/T32A16_20
           [Arabidopsis thaliana] gi|332659412|gb|AEE84812.1| long
           chain acyl-CoA synthetase 4 [Arabidopsis thaliana]
          Length = 666

 Score =  196 bits (499), Expect = 1e-48
 Identities = 83/118 (70%), Positives = 104/118 (88%)
 Frame = -1

Query: 356 KYVIEMEKGKESVDGKPSMGPVYRSVFAKDGFPQPVEGLNSCWDIFRISYEKYPENRMLG 177
           KY+ ++E+GKE  DG+PS+GPVYRS+FAKDGFP P+EG++SCWD+FR+S EKYP N MLG
Sbjct: 6   KYIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPDPIEGMDSCWDVFRMSVEKYPNNPMLG 65

Query: 176 RREIVDGKPGKYVWHTYKEVYDLVTKVGKSIRTFGIEKGGRCGIYGANSPEWIMSMEA 3
           RREIVDGKPGKYVW TY+EVYD+V K+G S+R+ G++   +CGIYGANSPEWI+SMEA
Sbjct: 66  RREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEA 123


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