BLASTX nr result

ID: Coptis25_contig00037905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037905
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278569.1| PREDICTED: casparian strip membrane protein ...   139   3e-31
sp|P0DI44.1|CASP_SOLTU RecName: Full=Casparian strip membrane pr...   125   5e-27
ref|XP_002318369.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002533115.1| conserved hypothetical protein [Ricinus comm...   115   3e-24
ref|NP_001174676.1| Os06g0231050 [Oryza sativa Japonica Group] g...   113   1e-23

>ref|XP_002278569.1| PREDICTED: casparian strip membrane protein VIT_14s0108g01050
           [Vitis vinifera] gi|226713606|sp|A7PMY7.1|CASP3_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_14s0108g01050 gi|296082941|emb|CBI22242.3| unnamed
           protein product [Vitis vinifera]
          Length = 186

 Score =  139 bits (349), Expect = 3e-31
 Identities = 72/113 (63%), Positives = 85/113 (75%)
 Frame = -3

Query: 341 AGAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 162
           AGA+ELGE SK S  R G+N+G SILDFILRL  ++GTLGSAIAMGTT+ETLPFFTQF +
Sbjct: 3   AGALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQFTQ 62

Query: 161 FKAEYNDLPTFTFFXXXXXXXXXXXXXXXXXSIYHIVRTGSRNTRVVLIFFDT 3
           F+AEY+DLPTFTFF                 SI HIVR+G+R +R+VLIFFDT
Sbjct: 63  FRAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDT 115


>sp|P0DI44.1|CASP_SOLTU RecName: Full=Casparian strip membrane protein 1
          Length = 188

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/112 (57%), Positives = 82/112 (73%)
 Frame = -3

Query: 341 AGAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 162
           AGA+ELG ASK +  + G+N+G SILD  +R+ A++ TLGSAIAMGTT+ETLPFFTQF+R
Sbjct: 3   AGALELGHASKTT--KSGVNRGMSILDLFIRIIAIIATLGSAIAMGTTNETLPFFTQFVR 60

Query: 161 FKAEYNDLPTFTFFXXXXXXXXXXXXXXXXXSIYHIVRTGSRNTRVVLIFFD 6
           FKA+Y+DLPTFTFF                 SIYHI+R+ ++ TR+ LIFFD
Sbjct: 61  FKAKYSDLPTFTFFVVANAIVSAYLVLSLGLSIYHIMRSRAQATRIALIFFD 112


>ref|XP_002318369.1| predicted protein [Populus trichocarpa]
           gi|238055373|sp|B9I534.1|CASP1_POPTR RecName:
           Full=Casparian strip membrane protein POPTRDRAFT_569472
           gi|222859042|gb|EEE96589.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/113 (54%), Positives = 82/113 (72%)
 Frame = -3

Query: 341 AGAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIR 162
           AG +ELGE  K S+ +  +N+G +ILDFILR+ A +GTLGSAI+M TT+ETLPFFTQFIR
Sbjct: 3   AGPIELGEG-KSSAPKAAVNRGVAILDFILRILAFIGTLGSAISMATTNETLPFFTQFIR 61

Query: 161 FKAEYNDLPTFTFFXXXXXXXXXXXXXXXXXSIYHIVRTGSRNTRVVLIFFDT 3
           F+AEY+DLPTFTFF                 SI++IVR+ ++N+R++LI  DT
Sbjct: 62  FRAEYDDLPTFTFFVVANGVVSAYLLFSLPFSIFNIVRSKAQNSRILLIILDT 114


>ref|XP_002533115.1| conserved hypothetical protein [Ricinus communis]
           gi|238055372|sp|B9T4E6.1|CSPL3_RICCO RecName:
           Full=CASP-like protein RCOM_0299440
           gi|223527078|gb|EEF29260.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score =  115 bits (289), Expect = 3e-24
 Identities = 66/111 (59%), Positives = 78/111 (70%)
 Frame = -3

Query: 335 AMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIRFK 156
           A+ELG A K S+   G N+G SILDFILRL ALVGTL SAI MGTT+ETLPF TQFIRF+
Sbjct: 5   AIELGVA-KDSTPIGGANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFIRFR 63

Query: 155 AEYNDLPTFTFFXXXXXXXXXXXXXXXXXSIYHIVRTGSRNTRVVLIFFDT 3
           AEY+DLPTFTFF                 SI +IVR+ ++N R++LI FDT
Sbjct: 64  AEYDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDT 114


>ref|NP_001174676.1| Os06g0231050 [Oryza sativa Japonica Group]
           gi|75116473|sp|Q67X40.1|CASP3_ORYSJ RecName:
           Full=Casparian strip membrane protein Os06g0231050
           gi|342162483|sp|A2YAZ1.1|CASP3_ORYSI RecName:
           Full=Casparian strip membrane protein OsI_22263
           gi|51535409|dbj|BAD37279.1| integral membrane family
           protein-like [Oryza sativa Japonica Group]
           gi|125554646|gb|EAZ00252.1| hypothetical protein
           OsI_22263 [Oryza sativa Indica Group]
           gi|125596586|gb|EAZ36366.1| hypothetical protein
           OsJ_20694 [Oryza sativa Japonica Group]
           gi|255676859|dbj|BAH93404.1| Os06g0231050 [Oryza sativa
           Japonica Group]
          Length = 184

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/111 (54%), Positives = 77/111 (69%)
 Frame = -3

Query: 338 GAMELGEASKVSSHRRGMNKGASILDFILRLGALVGTLGSAIAMGTTDETLPFFTQFIRF 159
           G+ E GE SK    R G++KG SILD ILR  A++GTL SAIAMGTT++TLPFFTQFIRF
Sbjct: 3   GSEEHGETSKAPLSR-GVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRF 61

Query: 158 KAEYNDLPTFTFFXXXXXXXXXXXXXXXXXSIYHIVRTGSRNTRVVLIFFD 6
           KA+Y+DLPT TFF                 SI H++R+ ++ +R++LIFFD
Sbjct: 62  KAQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFD 112


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