BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037902
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL99274.1| succinyl-CoA ligase [GDP-forming] subunit beta, p...    75   4e-12
ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...    74   9e-12
ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit be...    74   2e-11
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So...    74   2e-11
gb|ABA46791.1| succinyl-CoA ligase beta subunit-like protein [So...    74   2e-11

>gb|AEL99274.1| succinyl-CoA ligase [GDP-forming] subunit beta, partial [Silene
           latifolia] gi|343173145|gb|AEL99275.1| succinyl-CoA
           ligase [GDP-forming] subunit beta, partial [Silene
           latifolia]
          Length = 113

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/73 (61%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -2

Query: 429 LVPADVKLHY---ATCCQKEIFAFHYSSQEDPRAITAA*ADLNHIGLANTLRCMMNGARL 259
           LV AD KL++   A   QKEIFA   +SQEDPR +TAA ADLN+IGL   + CM+NGA L
Sbjct: 10  LVAADAKLNFDDNAAFRQKEIFALRDTSQEDPREVTAAKADLNYIGLDGEIGCMVNGAGL 69

Query: 258 VIAMATMDGIKLH 220
             AMATMD IKLH
Sbjct: 70  --AMATMDIIKLH 80


>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Glycine max]
          Length = 422

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/73 (60%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = -2

Query: 429 LVPADVKLHY---ATCCQKEIFAFHYSSQEDPRAITAA*ADLNHIGLANTLRCMMNGARL 259
           LV AD KL++   A   QKEIFA   ++QEDPR +TAA ADLN+IGL   + CM+NGA L
Sbjct: 244 LVAADAKLNFDDNAAYRQKEIFALRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGL 303

Query: 258 VIAMATMDGIKLH 220
             AMATMD IKLH
Sbjct: 304 --AMATMDIIKLH 314


>ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
           [Solanum lycopersicum]
           gi|75147005|sp|Q84LB6.1|SUCB_SOLLC RecName:
           Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; Short=SlSCoALbeta; Flags: Precursor
           gi|27803873|gb|AAO22150.1| succinyl CoA ligase beta
           subunit [Solanum lycopersicum]
          Length = 417

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
 Frame = -2

Query: 429 LVPADVKLHY---ATCCQKEIFAFHYSSQEDPRAITAA*ADLNHIGLANTLRCMMNGARL 259
           LV AD KL++   A   QKEIF+   SSQEDPR + AA ADLN+IGL   + CM+NGA L
Sbjct: 240 LVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGL 299

Query: 258 VIAMATMDGIKLH 220
             AMATMD IKLH
Sbjct: 300 --AMATMDIIKLH 310


>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
 Frame = -2

Query: 429 LVPADVKLHY---ATCCQKEIFAFHYSSQEDPRAITAA*ADLNHIGLANTLRCMMNGARL 259
           LV AD KL++   A   QKEIF+   SSQEDPR + AA ADLN+IGL   + CM+NGA L
Sbjct: 244 LVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGL 303

Query: 258 VIAMATMDGIKLH 220
             AMATMD IKLH
Sbjct: 304 --AMATMDIIKLH 314


>gb|ABA46791.1| succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 311

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/73 (60%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
 Frame = -2

Query: 429 LVPADVKLHY---ATCCQKEIFAFHYSSQEDPRAITAA*ADLNHIGLANTLRCMMNGARL 259
           LV AD KL++   A   QKEIF+   SSQEDPR + AA ADLN+IGL   + CM+NGA L
Sbjct: 134 LVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGL 193

Query: 258 VIAMATMDGIKLH 220
             AMATMD IKLH
Sbjct: 194 --AMATMDIIKLH 204