BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037891
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...    90   2e-16
ref|XP_002886104.1| pentatricopeptide repeat-containing protein ...    81   8e-14
sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-c...    79   5e-13
ref|NP_179312.1| pentatricopeptide repeat-containing protein [Ar...    79   5e-13
ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12

>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/67 (59%), Positives = 54/67 (80%)
 Frame = +1

Query: 1   NFYMKCGDINSALSVFACMVNKDSVSWNIVIHGCLDSGPYKEGLCMFVKARGQVFEPNVS 180
           NFY+KCG++++A+SVF  M ++DSVSWN++IHGCLD G   EGL  F+ AR   FEPN+S
Sbjct: 107 NFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNIS 166

Query: 181 TLVLVLQ 201
           TLVL++Q
Sbjct: 167 TLVLLVQ 173


>ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331944|gb|EFH62363.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 723

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = +1

Query: 1   NFYMKCGDINSALSVFACMVNKDSVSWNIVIHGCLDSGPYKEGLCMFVKARGQVFEPNVS 180
           +FYMKCGD+ S L  F CM ++DSVSWN+++ G LD G  +EGL  F K R   FEPNVS
Sbjct: 77  DFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVS 136

Query: 181 TLVLVL 198
           TLVLV+
Sbjct: 137 TLVLVI 142


>sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
          Length = 736

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = +1

Query: 1   NFYMKCGDINSALSVFACMVNKDSVSWNIVIHGCLDSGPYKEGLCMFVKARGQVFEPNVS 180
           +FYMKCGD+ S L  F CM ++DSVSWN+++ G LD G  +EGL  F K R   FEPN S
Sbjct: 90  DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTS 149

Query: 181 TLVLVL 198
           TLVLV+
Sbjct: 150 TLVLVI 155


>ref|NP_179312.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|4584344|gb|AAD25139.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|330251504|gb|AEC06598.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = +1

Query: 1   NFYMKCGDINSALSVFACMVNKDSVSWNIVIHGCLDSGPYKEGLCMFVKARGQVFEPNVS 180
           +FYMKCGD+ S L  F CM ++DSVSWN+++ G LD G  +EGL  F K R   FEPN S
Sbjct: 69  DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTS 128

Query: 181 TLVLVL 198
           TLVLV+
Sbjct: 129 TLVLVI 134


>ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = +1

Query: 1   NFYMKCGDINSALSVFACMVNKDSVSWNIVIHGCLDSGPYKEGLCMFVKARGQVFEPNVS 180
           +FYMK GD++SA   F    NKDSVSWN+++HG   +G    GLC F+K R   F+PN+S
Sbjct: 90  DFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNIS 149

Query: 181 TLVLVLQ 201
           +L+LV+Q
Sbjct: 150 SLLLVIQ 156