BLASTX nr result

ID: Coptis25_contig00037888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037888
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513940.1| conserved hypothetical protein [Ricinus comm...   112   4e-23
emb|CBI19183.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002285764.1| PREDICTED: uncharacterized protein LOC100253...   110   2e-22
ref|XP_004171128.1| PREDICTED: uncharacterized protein LOC101224...    97   2e-18
ref|XP_003573070.1| PREDICTED: uncharacterized protein LOC100838...    84   1e-14

>ref|XP_002513940.1| conserved hypothetical protein [Ricinus communis]
           gi|223547026|gb|EEF48523.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/82 (64%), Positives = 65/82 (79%)
 Frame = +1

Query: 82  FSKTTFFLAVLVLSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSILWYGQFTP 261
           F+ + FF+  ++++L N C  +RKLTSLY+PPPM LSYHNG LLEG + VSILWYGQFTP
Sbjct: 10  FTMSLFFIVFILITLTNSCHCSRKLTSLYEPPPMSLSYHNGPLLEGDVHVSILWYGQFTP 69

Query: 262 SQKSIVADFLLSLNPTKQMVSS 327
            Q+SIV+DFLLSLNPT    SS
Sbjct: 70  PQQSIVSDFLLSLNPTHSSSSS 91


>emb|CBI19183.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +1

Query: 67  MGFIQFSKTTFFLAVLV---LSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSI 237
           M F    KT   + V+V   L  I+ CF ARKLTSLYQPPPM L+YHNG LLEG LPVSI
Sbjct: 1   MAFSLSLKTHSLVVVVVIFHLFFISPCFCARKLTSLYQPPPMALTYHNGALLEGHLPVSI 60

Query: 238 LWYGQFTPSQKSIVADFLLSLNPTKQ 315
           LWYGQF+P+QKSIVADFLLSL+P  Q
Sbjct: 61  LWYGQFSPAQKSIVADFLLSLDPHDQ 86


>ref|XP_002285764.1| PREDICTED: uncharacterized protein LOC100253906 [Vitis vinifera]
           gi|147765767|emb|CAN68979.1| hypothetical protein
           VITISV_040775 [Vitis vinifera]
          Length = 316

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +1

Query: 67  MGFIQFSKTTFFLAVLV---LSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSI 237
           M F    KT   + V+V   L  I+ CF ARKLTSLYQPPPM L+YHNG LLEG LPVSI
Sbjct: 1   MAFSLSLKTHSLVVVVVIFHLFFISPCFCARKLTSLYQPPPMALTYHNGALLEGHLPVSI 60

Query: 238 LWYGQFTPSQKSIVADFLLSLNPTKQ 315
           LWYGQF+P+QKSIVADFLLSL+P  Q
Sbjct: 61  LWYGQFSPAQKSIVADFLLSLDPHDQ 86


>ref|XP_004171128.1| PREDICTED: uncharacterized protein LOC101224428 [Cucumis sativus]
          Length = 313

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/80 (58%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = +1

Query: 67  MGFIQFSKTTFFLAVL-VLSLINLCFGARKLTSLYQPPPMLLSYHNGVLLEGKLPVSILW 243
           MGF QF  +   + V  +++L NL FGARKL SLY+ PPM + YHNG LL+G +PVSILW
Sbjct: 1   MGFFQFPNSILVVIVFCMMNLFNLGFGARKLASLYEAPPMGIRYHNGALLQGNVPVSILW 60

Query: 244 YGQFTPSQKSIVADFLLSLN 303
           YG+FT  QK+IV DF LSL+
Sbjct: 61  YGKFTAPQKAIVIDFFLSLD 80


>ref|XP_003573070.1| PREDICTED: uncharacterized protein LOC100838104 [Brachypodium
           distachyon]
          Length = 321

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 106 AVLVLSLINLCFGARKLTSLYQPPPM-LLSYHNGVLLEGKLPVSILWYGQFTPSQKSIVA 282
           AV++ S   L  GAR+   LY P P  +LSYHNG +L G +PVSI WYGQFTP+QKSI+ 
Sbjct: 16  AVMLASTAQLSMGARRRMELYTPDPADMLSYHNGAVLHGDIPVSIFWYGQFTPAQKSIIL 75

Query: 283 DFLLSLNPTKQ 315
           DFLLSL    Q
Sbjct: 76  DFLLSLTAAPQ 86


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