BLASTX nr result

ID: Coptis25_contig00037836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037836
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|2...   194   6e-48
ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002269907.1| PREDICTED: rac-like GTP-binding protein 7 [V...   191   4e-47
ref|NP_566024.1| Rac-like GTP-binding protein ARAC9 [Arabidopsis...   189   3e-46
emb|CAI84891.1| putative Rho GTPase [Medicago sativa subsp. x va...   188   3e-46

>ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|223534156|gb|EEF35872.1|
           rac gtpase, putative [Ricinus communis]
          Length = 202

 Score =  194 bits (493), Expect = 6e-48
 Identities = 92/100 (92%), Positives = 98/100 (98%)
 Frame = -2

Query: 302 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 123
           KFIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+VMV G+ ++LGLWDTAGQ
Sbjct: 11  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVMVDGKTVNLGLWDTAGQ 70

Query: 122 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPEL 3
           EDYNRLRPLSYRGADVFILAFSLISRPS+ENISKKWVPEL
Sbjct: 71  EDYNRLRPLSYRGADVFILAFSLISRPSYENISKKWVPEL 110


>ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|222835162|gb|EEE73597.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/100 (90%), Positives = 98/100 (98%)
 Frame = -2

Query: 302 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 123
           KFIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+V G+ ++LGLWDTAGQ
Sbjct: 4   KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNLGLWDTAGQ 63

Query: 122 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPEL 3
           EDYNRLRPLSYRGADVFILAFSLISRPS+EN+SKKWVPEL
Sbjct: 64  EDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPEL 103


>ref|XP_002269907.1| PREDICTED: rac-like GTP-binding protein 7 [Vitis vinifera]
           gi|297734644|emb|CBI16695.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/100 (90%), Positives = 97/100 (97%)
 Frame = -2

Query: 302 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 123
           +FIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+  G+ I+LGLWDTAGQ
Sbjct: 7   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLADGQTINLGLWDTAGQ 66

Query: 122 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPEL 3
           EDYNRLRPLSYRGADVF+LAFSLISRPSFENISKKWVPEL
Sbjct: 67  EDYNRLRPLSYRGADVFLLAFSLISRPSFENISKKWVPEL 106


>ref|NP_566024.1| Rac-like GTP-binding protein ARAC9 [Arabidopsis thaliana]
           gi|51701867|sp|Q9XGU0.1|RAC9_ARATH RecName:
           Full=Rac-like GTP-binding protein ARAC9; AltName:
           Full=GTPase protein ROP8; Flags: Precursor
           gi|5381420|gb|AAD42972.1|AF156896_1 rac-like protein
           ARAC9 [Arabidopsis thaliana] gi|20197030|gb|AAC27471.2|
           putative GTP-binding protein [Arabidopsis thaliana]
           gi|105829866|gb|ABF74706.1| At2g44690 [Arabidopsis
           thaliana] gi|330255362|gb|AEC10456.1| Rac-like
           GTP-binding protein ARAC9 [Arabidopsis thaliana]
          Length = 209

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/99 (88%), Positives = 97/99 (97%)
 Frame = -2

Query: 299 FIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQE 120
           FIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNF+A+V+V G+ ++LGLWDTAGQE
Sbjct: 18  FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77

Query: 119 DYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPEL 3
           DYNR+RPLSYRGADVFILAFSLISRPSFENI+KKWVPEL
Sbjct: 78  DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPEL 116


>emb|CAI84891.1| putative Rho GTPase [Medicago sativa subsp. x varia]
          Length = 197

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/100 (87%), Positives = 97/100 (97%)
 Frame = -2

Query: 302 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 123
           +FIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+V G I++LGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSIVNLGLWDTAGQ 64

Query: 122 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPEL 3
           EDYNRLRPLSYRGADVFILAFSLIS+ S+EN+SKKW+PEL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL 104


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