BLASTX nr result

ID: Coptis25_contig00037782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037782
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547476.1| PREDICTED: putative transcription factor bHL...    59   3e-07
ref|XP_003534924.1| PREDICTED: putative transcription factor bHL...    59   5e-07
ref|XP_003595200.1| Transcription factor MYC4 [Medicago truncatu...    57   1e-06
gb|ABN05741.1| Helix-loop-helix DNA-binding [Medicago truncatula]      57   1e-06

>ref|XP_003547476.1| PREDICTED: putative transcription factor bHLH041-like [Glycine max]
          Length = 538

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +2

Query: 227 MDAVFCLDVEARSHFVKTLAQSIGCSYMCLWSYVPLLPDRLFSIDGWY 370
           M++VF L V AR+ F++ L QS+GCSY+CLW+Y  + P+RL  +DG Y
Sbjct: 4   MESVFSLSVAARTDFIQFLVQSLGCSYICLWAYDSISPNRLSFLDGIY 51


>ref|XP_003534924.1| PREDICTED: putative transcription factor bHLH041-like [Glycine max]
          Length = 544

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +2

Query: 227 MDAVFCLDVEARSHFVKTLAQSIGCSYMCLWSYVPLLPDRLFSIDGWY 370
           M++VF L V AR+ F++ L QS GCSY+CLW+Y  + P+RL  +DG Y
Sbjct: 4   MESVFSLSVAARADFIQFLVQSFGCSYICLWAYDSISPNRLSFLDGIY 51


>ref|XP_003595200.1| Transcription factor MYC4 [Medicago truncatula]
           gi|355484248|gb|AES65451.1| Transcription factor MYC4
           [Medicago truncatula]
          Length = 528

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +2

Query: 227 MDAVFCLDVEARSHFVKTLAQSIGCSYMCLWSYVPLLPDRLFSIDGWY 370
           M+ VF L V  R+ F+ +L QS+GCSY+CLW+Y  +L +RL  +DG+Y
Sbjct: 1   MEGVFSLPVAVRTEFIHSLMQSLGCSYICLWAYDIMLSNRLSFLDGFY 48


>gb|ABN05741.1| Helix-loop-helix DNA-binding [Medicago truncatula]
          Length = 382

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +2

Query: 227 MDAVFCLDVEARSHFVKTLAQSIGCSYMCLWSYVPLLPDRLFSIDGWY 370
           M+ VF L V  R+ F+ +L QS+GCSY+CLW+Y  +L +RL  +DG+Y
Sbjct: 1   MEGVFSLPVAVRTEFIHSLMQSLGCSYICLWAYDIMLSNRLSFLDGFY 48


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