BLASTX nr result

ID: Coptis25_contig00037775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037775
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002319019.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002512377.1| conserved hypothetical protein [Ricinus comm...    82   5e-14
ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259...    78   7e-13
emb|CBI36769.3| unnamed protein product [Vitis vinifera]               78   7e-13

>ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|222838278|gb|EEE76643.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/62 (69%), Positives = 53/62 (85%)
 Frame = +3

Query: 78  KCIVTLIGKWRRMSLPAMLVGETLGEIMQASQFAKEIVAAVEAKTNKISHDDPKRPMSQR 257
           K   T IG+WRRMSLPAMLVGET+GEI+QASQFA+EIVAAV  KT K++ +DPK P++Q+
Sbjct: 88  KLPATSIGEWRRMSLPAMLVGETMGEILQASQFAREIVAAVCCKTKKLTLEDPKTPLTQQ 147

Query: 258 RK 263
           RK
Sbjct: 148 RK 149


>ref|XP_002319019.1| predicted protein [Populus trichocarpa] gi|222857395|gb|EEE94942.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +3

Query: 78  KCIVTLIGKWRRMSLPAMLVGETLGEIMQASQFAKEIVAAVEAKTNKISHDDPKRPMSQR 257
           K   T IG+WRRMSLPAMLVGET+GEI+QASQFA+EIVAAV  KT K + +DPK P++Q+
Sbjct: 88  KLPATSIGEWRRMSLPAMLVGETVGEILQASQFAREIVAAVACKTKKSTLEDPKTPVTQQ 147

Query: 258 RK 263
           RK
Sbjct: 148 RK 149


>ref|XP_002512377.1| conserved hypothetical protein [Ricinus communis]
           gi|223548338|gb|EEF49829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 359

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/62 (61%), Positives = 52/62 (83%)
 Frame = +3

Query: 78  KCIVTLIGKWRRMSLPAMLVGETLGEIMQASQFAKEIVAAVEAKTNKISHDDPKRPMSQR 257
           K   +++G+W+RMSLPAMLVGET+GEI+QAS+FAKEIV AV  KT K + +DP+ P++Q+
Sbjct: 88  KLPASVVGEWKRMSLPAMLVGETVGEILQASKFAKEIVEAVACKTKKSTIEDPQTPVTQQ 147

Query: 258 RK 263
           RK
Sbjct: 148 RK 149


>ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259649 [Vitis vinifera]
          Length = 357

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +3

Query: 99  GKWRRMSLPAMLVGETLGEIMQASQFAKEIVAAVEAKTNKISHDDPKRPMSQRRK 263
           G+WRRMSLPAMLVGET+GEI+QASQFA+EIVAA    T K S DDPK P++Q RK
Sbjct: 95  GEWRRMSLPAMLVGETVGEILQASQFAREIVAA----TKKTSMDDPKTPVTQGRK 145


>emb|CBI36769.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +3

Query: 99  GKWRRMSLPAMLVGETLGEIMQASQFAKEIVAAVEAKTNKISHDDPKRPMSQRRK 263
           G+WRRMSLPAMLVGET+GEI+QASQFA+EIVAA    T K S DDPK P++Q RK
Sbjct: 95  GEWRRMSLPAMLVGETVGEILQASQFAREIVAA----TKKTSMDDPKTPVTQGRK 145


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