BLASTX nr result

ID: Coptis25_contig00037772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037772
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222...   170   1e-40
ref|XP_004166326.1| PREDICTED: zinc transporter 6, chloroplastic...   167   8e-40
ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic...   167   8e-40
ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic...   167   1e-39
ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222...   165   3e-39

>ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222849652|gb|EEE87199.1|
           ZIP transporter [Populus trichocarpa]
          Length = 335

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/119 (68%), Positives = 99/119 (83%)
 Frame = -3

Query: 357 CVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTLVIK 178
           C+ + T+ +TCR++QAATHLKLISIL+IF TS+ GIS PV+LAR FQGKP ++K TL+IK
Sbjct: 5   CLIDATRSTTCRDTQAATHLKLISILIIFFTSIIGISFPVLLARYFQGKPVYDKATLIIK 64

Query: 177 CFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTAT 1
           CFAAGVIL+TS VHVLPDAF ALSDC VAS HPWKDFPF GL +++G     LVD+TA+
Sbjct: 65  CFAAGVILSTSLVHVLPDAFGALSDCHVASKHPWKDFPFAGLITLIGVLLALLVDLTAS 123


>ref|XP_004166326.1| PREDICTED: zinc transporter 6, chloroplastic-like [Cucumis sativus]
          Length = 334

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/119 (66%), Positives = 95/119 (79%)
 Frame = -3

Query: 357 CVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTLVIK 178
           C T+ T +S CR+ +AA HLKLISI +IFITSV G+SSPV+L R F GKP ++K  L +K
Sbjct: 5   CPTDFTHDSACRDGRAAAHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPLYDKAILTVK 64

Query: 177 CFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTAT 1
           CFAAGVIL+TS VHVLPDAFDALSDC++AS HPW+DFPF+GL +MVG      VDVTAT
Sbjct: 65  CFAAGVILSTSLVHVLPDAFDALSDCRIASQHPWRDFPFSGLVTMVGALVALFVDVTAT 123


>ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic-like [Glycine max]
          Length = 394

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/139 (61%), Positives = 102/139 (73%), Gaps = 5/139 (3%)
 Frame = -3

Query: 402 ILIFPTLTSFV-----TMTHCVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPV 238
           I ++ TL+ F       M  CVT+L Q + CRNS AATHLK+ISI  IF+TSV G+S+PV
Sbjct: 52  ISLYTTLSQFQLLFVHNMAECVTDLAQAAACRNSAAATHLKVISICTIFVTSVMGVSTPV 111

Query: 237 MLARKFQGKPTFEKVTLVIKCFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFT 58
           MLAR FQGK  ++   L+IKCFAAGVILATS VHVLPDAF ALSDCQVAS HPWKDFPF 
Sbjct: 112 MLARYFQGKSLYDIAILLIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFA 171

Query: 57  GLGSMVGXXXXXLVDVTAT 1
           GL +++G     LVD  A+
Sbjct: 172 GLVTLIGVLMALLVDTVAS 190


>ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic [Vitis vinifera]
           gi|297745865|emb|CBI15921.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/122 (67%), Positives = 96/122 (78%)
 Frame = -3

Query: 366 MTHCVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTL 187
           M  CV +  +   CR+ +AA HLKL+SI VIFITSV GISSPVMLAR FQGKP ++K  L
Sbjct: 1   MASCVGDTARALACRDGRAAAHLKLVSIFVIFITSVVGISSPVMLARVFQGKPMYDKAIL 60

Query: 186 VIKCFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVT 7
           +IKCFAAGVIL+TS VHVLPDAF ALSDC VAS HPWKDFPF+GL +M+G     LVD+T
Sbjct: 61  IIKCFAAGVILSTSLVHVLPDAFAALSDCHVASHHPWKDFPFSGLVTMIGAILALLVDLT 120

Query: 6   AT 1
           A+
Sbjct: 121 AS 122


>ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222847251|gb|EEE84798.1|
           ZIP transporter [Populus trichocarpa]
          Length = 337

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/119 (64%), Positives = 98/119 (82%)
 Frame = -3

Query: 357 CVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTLVIK 178
           C+ + T+ +TCR++QAATHLKLISI++IF TS+ GISSPV+LAR F GK  ++K+TL+IK
Sbjct: 5   CLIDATRSATCRDTQAATHLKLISIVIIFFTSIIGISSPVLLARYFHGKALYDKITLIIK 64

Query: 177 CFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTAT 1
           CFAAGVIL+TS VHVLPDA+DALSDC VAS HPWKDFPF G  +++G     LVD+ A+
Sbjct: 65  CFAAGVILSTSLVHVLPDAYDALSDCHVASKHPWKDFPFAGFVTLIGVLLALLVDLAAS 123


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