BLASTX nr result

ID: Coptis25_contig00037762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037762
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40742.3| unnamed protein product [Vitis vinifera]              253   2e-65
ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, ...   253   2e-65
ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   253   2e-65
ref|XP_002300634.1| predicted protein [Populus trichocarpa] gi|2...   251   1e-64
gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]              229   4e-58

>emb|CBI40742.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  253 bits (647), Expect = 2e-65
 Identities = 126/192 (65%), Positives = 147/192 (76%)
 Frame = +3

Query: 144 SCVGVNYGTLGNNLPPPKEVAQLLQSTLIDKVKIYDTNPDILEAFSNTDIDLIXXXXXXX 323
           S VGVNYGTLGNNLPPPK+VAQLLQSTLIDKVKIYDTNP+ILEAFSNT IDLI       
Sbjct: 47  SSVGVNYGTLGNNLPPPKKVAQLLQSTLIDKVKIYDTNPEILEAFSNTGIDLIVAVENYH 106

Query: 324 XXXISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQAIGNIHSV 503
              IS D+  A+EWF  R++PF+P+TSIVAIAVGNE+LT+D   L  +ALVQA+ N+H V
Sbjct: 107 VSNISSDVAAADEWFATRVAPFIPATSIVAIAVGNEYLTTDTDHLALNALVQAMQNLHGV 166

Query: 504 LTAHGLDRKIKVTTPHSMAILAXXXXXXXXXXXXXXXXXMTSILEFLSETGAPFMVNAYP 683
           L A GLDRKIKVTTPHSMA+LA                 MTSI+ F+++TGAPFM+NAYP
Sbjct: 167 LLARGLDRKIKVTTPHSMAVLASSFPPSASTFALELIPTMTSIVGFIADTGAPFMINAYP 226

Query: 684 YFAYRDNPSRVD 719
           YFAYRDNP ++D
Sbjct: 227 YFAYRDNPGKID 238


>ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223551405|gb|EEF52891.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 458

 Score =  253 bits (647), Expect = 2e-65
 Identities = 128/192 (66%), Positives = 146/192 (76%)
 Frame = +3

Query: 144 SCVGVNYGTLGNNLPPPKEVAQLLQSTLIDKVKIYDTNPDILEAFSNTDIDLIXXXXXXX 323
           S VGVNYGTLGNNLP PK+VAQLLQSTLIDKVKIYDTNP+ILEAFSNT IDLI       
Sbjct: 21  SAVGVNYGTLGNNLPSPKKVAQLLQSTLIDKVKIYDTNPEILEAFSNTGIDLIVAVENYH 80

Query: 324 XXXISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQAIGNIHSV 503
              IS D++ A+EWF  R+ PF+P+TS+VAIAVGNE+LT+D   L P+ LVQA+ N+H+V
Sbjct: 81  VANISSDVSAADEWFANRVVPFIPATSVVAIAVGNEYLTTDPDHLRPNNLVQAMQNLHAV 140

Query: 504 LTAHGLDRKIKVTTPHSMAILAXXXXXXXXXXXXXXXXXMTSILEFLSETGAPFMVNAYP 683
           L A GLDRKIKVTTPHSMAILA                 MTSI+ FL+ETG+PFMVNAYP
Sbjct: 141 LVARGLDRKIKVTTPHSMAILASSFPPSASTFATTLMPTMTSIVAFLAETGSPFMVNAYP 200

Query: 684 YFAYRDNPSRVD 719
           YFAYRDNP  VD
Sbjct: 201 YFAYRDNPDSVD 212


>ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera]
           gi|147832741|emb|CAN72608.1| hypothetical protein
           VITISV_021340 [Vitis vinifera]
          Length = 460

 Score =  253 bits (647), Expect = 2e-65
 Identities = 126/192 (65%), Positives = 147/192 (76%)
 Frame = +3

Query: 144 SCVGVNYGTLGNNLPPPKEVAQLLQSTLIDKVKIYDTNPDILEAFSNTDIDLIXXXXXXX 323
           S VGVNYGTLGNNLPPPK+VAQLLQSTLIDKVKIYDTNP+ILEAFSNT IDLI       
Sbjct: 22  SSVGVNYGTLGNNLPPPKKVAQLLQSTLIDKVKIYDTNPEILEAFSNTGIDLIVAVENYH 81

Query: 324 XXXISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQAIGNIHSV 503
              IS D+  A+EWF  R++PF+P+TSIVAIAVGNE+LT+D   L  +ALVQA+ N+H V
Sbjct: 82  VSNISSDVAAADEWFATRVAPFIPATSIVAIAVGNEYLTTDTDHLALNALVQAMQNLHGV 141

Query: 504 LTAHGLDRKIKVTTPHSMAILAXXXXXXXXXXXXXXXXXMTSILEFLSETGAPFMVNAYP 683
           L A GLDRKIKVTTPHSMA+LA                 MTSI+ F+++TGAPFM+NAYP
Sbjct: 142 LLARGLDRKIKVTTPHSMAVLASSFPPSASTFALELIPTMTSIVGFIADTGAPFMINAYP 201

Query: 684 YFAYRDNPSRVD 719
           YFAYRDNP ++D
Sbjct: 202 YFAYRDNPGKID 213


>ref|XP_002300634.1| predicted protein [Populus trichocarpa] gi|222842360|gb|EEE79907.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  251 bits (640), Expect = 1e-64
 Identities = 127/194 (65%), Positives = 145/194 (74%)
 Frame = +3

Query: 138 NASCVGVNYGTLGNNLPPPKEVAQLLQSTLIDKVKIYDTNPDILEAFSNTDIDLIXXXXX 317
           N S VGVNYGTLGNNLP PK+VAQLLQSTLIDKVKIYDTNP+IL AFSNT IDLI     
Sbjct: 16  NVSAVGVNYGTLGNNLPSPKKVAQLLQSTLIDKVKIYDTNPEILGAFSNTGIDLIVAVEN 75

Query: 318 XXXXXISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQAIGNIH 497
                IS D + A+EW T R+ PF+P+TSIVAIAVGNE+LT+D   L P+AL+QA+ N+H
Sbjct: 76  YHVANISTDTSAADEWLTNRVVPFIPATSIVAIAVGNEYLTTDPDHLKPNALIQAMQNLH 135

Query: 498 SVLTAHGLDRKIKVTTPHSMAILAXXXXXXXXXXXXXXXXXMTSILEFLSETGAPFMVNA 677
           +VL   GLDRKIKVTTPHSMA+LA                 MTSI+ FL++TGAPFMVNA
Sbjct: 136 AVLVQRGLDRKIKVTTPHSMAVLASSFPPSASTFATTLMPVMTSIVGFLADTGAPFMVNA 195

Query: 678 YPYFAYRDNPSRVD 719
           YPYFAYRDNP  VD
Sbjct: 196 YPYFAYRDNPGMVD 209


>gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]
          Length = 456

 Score =  229 bits (584), Expect = 4e-58
 Identities = 118/194 (60%), Positives = 142/194 (73%)
 Frame = +3

Query: 138 NASCVGVNYGTLGNNLPPPKEVAQLLQSTLIDKVKIYDTNPDILEAFSNTDIDLIXXXXX 317
           N   VG+NYGT+GNNLP PK+VAQLLQST+ DKVKIYDTNP+ILEAFSNT IDLI     
Sbjct: 21  NVYGVGINYGTIGNNLPSPKKVAQLLQSTIFDKVKIYDTNPEILEAFSNTGIDLIVAVEN 80

Query: 318 XXXXXISKDITIAEEWFTKRISPFLPSTSIVAIAVGNEFLTSDDSQLDPSALVQAIGNIH 497
                +S   + A++WF  RI PF+PSTSIV IAVGNE+LT DD  LD +AL+QA+ N+H
Sbjct: 81  SHIRNLSATQSNADKWFVTRILPFIPSTSIVTIAVGNEYLT-DDQLLDHNALLQAMENLH 139

Query: 498 SVLTAHGLDRKIKVTTPHSMAILAXXXXXXXXXXXXXXXXXMTSILEFLSETGAPFMVNA 677
           SVL + GLDRKIKV+TPHSMA+LA                 MTSI+  L++T +PFM+NA
Sbjct: 140 SVLLSRGLDRKIKVSTPHSMAVLASSFPPSSSTFATTLLPVMTSIVALLADTNSPFMINA 199

Query: 678 YPYFAYRDNPSRVD 719
           YPYFAYRDNPS V+
Sbjct: 200 YPYFAYRDNPSMVN 213


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