BLASTX nr result

ID: Coptis25_contig00037747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037747
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527331.1| ATP-binding cassette transporter, putative [...   138   5e-31
ref|XP_003546211.1| PREDICTED: pleiotropic drug resistance prote...   137   1e-30
ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002304712.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002304711.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_002527331.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223533331|gb|EEF35083.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1359

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/80 (90%), Positives = 75/80 (93%)
 Frame = +3

Query: 3    RLGPEVNKETRKMFVDEVTDLVELNILKDALVGLPGVNGLSTEQRKRLTIAVELVANPSI 182
            RL PEV+ ETRKMFVDEV +LVELN L+ ALVGLPGVNGLSTEQRKRLTIAVELVANPSI
Sbjct: 874  RLAPEVDPETRKMFVDEVMELVELNPLRQALVGLPGVNGLSTEQRKRLTIAVELVANPSI 933

Query: 183  IFMDEPTSGLDARAAAIVMR 242
            IFMDEPTSGLDARAAAIVMR
Sbjct: 934  IFMDEPTSGLDARAAAIVMR 953


>ref|XP_003546211.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1418

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = +3

Query: 3    RLGPEVNKETRKMFVDEVTDLVELNILKDALVGLPGVNGLSTEQRKRLTIAVELVANPSI 182
            RL PEVN ETRKMF++EV +LVELN+L++ALVGLPGV+GLSTEQRKRLTIAVELVANPSI
Sbjct: 934  RLSPEVNSETRKMFIEEVMELVELNLLREALVGLPGVSGLSTEQRKRLTIAVELVANPSI 993

Query: 183  IFMDEPTSGLDARAAAIVMR 242
            IFMDEP SGLDARAAAIVMR
Sbjct: 994  IFMDEPISGLDARAAAIVMR 1013


>ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|222866274|gb|EEF03405.1|
            predicted protein [Populus trichocarpa]
          Length = 1429

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = +3

Query: 3    RLGPEVNKETRKMFVDEVTDLVELNILKDALVGLPGVNGLSTEQRKRLTIAVELVANPSI 182
            RL P+V+ ETRKMF++EV +LVELN L++ALVGLPGVNGLSTEQRKRLTIAVELVANPSI
Sbjct: 945  RLSPDVDSETRKMFIEEVVELVELNPLREALVGLPGVNGLSTEQRKRLTIAVELVANPSI 1004

Query: 183  IFMDEPTSGLDARAAAIVMR 242
            IFMDEPTSGLDARAAAIVMR
Sbjct: 1005 IFMDEPTSGLDARAAAIVMR 1024


>ref|XP_002304712.1| predicted protein [Populus trichocarpa] gi|222842144|gb|EEE79691.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RLGPEVNKETRKMFVDEVTDLVELNILKDALVGLPGVNGLSTEQRKRLTIAVELVANPSI 182
           RL PEV+ ETRKMF+DEV +LVEL+ L++ALVGLPGVNGLSTEQRKRLTIAVELVANPSI
Sbjct: 315 RLPPEVDSETRKMFIDEVMELVELDSLRNALVGLPGVNGLSTEQRKRLTIAVELVANPSI 374

Query: 183 IFMDEPTSGLDARAAAIVMR 242
           IFMDEPTSGLDARAAAIVMR
Sbjct: 375 IFMDEPTSGLDARAAAIVMR 394


>ref|XP_002304711.1| predicted protein [Populus trichocarpa] gi|222842143|gb|EEE79690.1|
            predicted protein [Populus trichocarpa]
          Length = 1403

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = +3

Query: 3    RLGPEVNKETRKMFVDEVTDLVELNILKDALVGLPGVNGLSTEQRKRLTIAVELVANPSI 182
            RL PEV+ ETRKMF+DEV +LVEL+ L++ALVGLPGVNGLSTEQRKRLTIAVELVANPSI
Sbjct: 919  RLPPEVDSETRKMFIDEVMELVELDSLRNALVGLPGVNGLSTEQRKRLTIAVELVANPSI 978

Query: 183  IFMDEPTSGLDARAAAIVMR 242
            IFMDEPTSGLDARAAAIVMR
Sbjct: 979  IFMDEPTSGLDARAAAIVMR 998


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