BLASTX nr result
ID: Coptis25_contig00037715
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037715 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267... 57 2e-06 ref|XP_001767408.1| predicted protein [Physcomitrella patens sub... 56 3e-06 ref|NP_001070847.1| SEC23-interacting protein [Danio rerio] gi|1... 55 6e-06 >ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267308 [Vitis vinifera] gi|297733839|emb|CBI15086.3| unnamed protein product [Vitis vinifera] Length = 294 Score = 56.6 bits (135), Expect = 2e-06 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 8/75 (10%) Frame = +3 Query: 57 IVRLEVPN--------LKLEELSLERFLDFLGLGDYLQTFQGKKVDMEALKNTDMNKLKD 212 + RL PN L +E L++ FL LGLG Y+ FQ +++DM ALK N LK+ Sbjct: 213 VSRLPPPNSIAQKNSYLGVEPLTVASFLHSLGLGKYIILFQAEEIDMTALKQMRDNDLKE 272 Query: 213 LKIPLGDRKMLLLGL 257 L IP+G RK +LL L Sbjct: 273 LGIPMGPRKKILLAL 287 >ref|XP_001767408.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681304|gb|EDQ67732.1| predicted protein [Physcomitrella patens subsp. patens] Length = 334 Score = 55.8 bits (133), Expect = 3e-06 Identities = 29/64 (45%), Positives = 42/64 (65%) Frame = +3 Query: 69 EVPNLKLEELSLERFLDFLGLGDYLQTFQGKKVDMEALKNTDMNKLKDLKIPLGDRKMLL 248 +VPN EE ++ FL LGL Y+ TFQ +++DM AL + N LK+L +P+G RK +L Sbjct: 183 KVPNT--EEQTVRTFLHSLGLEKYVATFQSEEIDMAALGHMSDNDLKELGVPMGPRKKIL 240 Query: 249 LGLR 260 L +R Sbjct: 241 LAIR 244 >ref|NP_001070847.1| SEC23-interacting protein [Danio rerio] gi|115528076|gb|AAI24598.1| SEC23 interacting protein [Danio rerio] gi|182890034|gb|AAI65191.1| Sec23ip protein [Danio rerio] Length = 977 Score = 55.1 bits (131), Expect = 6e-06 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%) Frame = +3 Query: 39 DVPAAGIVRLEVPNLKLEEL-SLERFLDFLGLGDYLQTFQGKKVDMEALKNTDMNKLKDL 215 +VP V E + EE SL L+ +GL +YL F+ +K+D+E+L ++ LK++ Sbjct: 609 EVPPVAAVEEEAKEEEEEETGSLSSVLEAIGLSEYLSIFENEKIDVESLLMCTVDDLKEM 668 Query: 216 KIPLGDRKMLLLGLRQLMAKEANR 287 IPLG RK L +++ AK+A R Sbjct: 669 SIPLGPRKKLANFIKEKSAKQAAR 692