BLASTX nr result

ID: Coptis25_contig00037715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037715
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267...    57   2e-06
ref|XP_001767408.1| predicted protein [Physcomitrella patens sub...    56   3e-06
ref|NP_001070847.1| SEC23-interacting protein [Danio rerio] gi|1...    55   6e-06

>ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267308 [Vitis vinifera]
           gi|297733839|emb|CBI15086.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
 Frame = +3

Query: 57  IVRLEVPN--------LKLEELSLERFLDFLGLGDYLQTFQGKKVDMEALKNTDMNKLKD 212
           + RL  PN        L +E L++  FL  LGLG Y+  FQ +++DM ALK    N LK+
Sbjct: 213 VSRLPPPNSIAQKNSYLGVEPLTVASFLHSLGLGKYIILFQAEEIDMTALKQMRDNDLKE 272

Query: 213 LKIPLGDRKMLLLGL 257
           L IP+G RK +LL L
Sbjct: 273 LGIPMGPRKKILLAL 287


>ref|XP_001767408.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162681304|gb|EDQ67732.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 334

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = +3

Query: 69  EVPNLKLEELSLERFLDFLGLGDYLQTFQGKKVDMEALKNTDMNKLKDLKIPLGDRKMLL 248
           +VPN   EE ++  FL  LGL  Y+ TFQ +++DM AL +   N LK+L +P+G RK +L
Sbjct: 183 KVPNT--EEQTVRTFLHSLGLEKYVATFQSEEIDMAALGHMSDNDLKELGVPMGPRKKIL 240

Query: 249 LGLR 260
           L +R
Sbjct: 241 LAIR 244


>ref|NP_001070847.1| SEC23-interacting protein [Danio rerio] gi|115528076|gb|AAI24598.1|
           SEC23 interacting protein [Danio rerio]
           gi|182890034|gb|AAI65191.1| Sec23ip protein [Danio
           rerio]
          Length = 977

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +3

Query: 39  DVPAAGIVRLEVPNLKLEEL-SLERFLDFLGLGDYLQTFQGKKVDMEALKNTDMNKLKDL 215
           +VP    V  E    + EE  SL   L+ +GL +YL  F+ +K+D+E+L    ++ LK++
Sbjct: 609 EVPPVAAVEEEAKEEEEEETGSLSSVLEAIGLSEYLSIFENEKIDVESLLMCTVDDLKEM 668

Query: 216 KIPLGDRKMLLLGLRQLMAKEANR 287
            IPLG RK L   +++  AK+A R
Sbjct: 669 SIPLGPRKKLANFIKEKSAKQAAR 692


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