BLASTX nr result

ID: Coptis25_contig00037704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037704
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-24
emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]    92   8e-24
emb|CBI20077.3| unnamed protein product [Vitis vinifera]               86   4e-23
emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]    87   4e-22
emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera]    87   6e-22

>ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|222873215|gb|EEF10346.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 75.5 bits (184), Expect(2) = 5e-24
 Identities = 31/81 (38%), Positives = 54/81 (66%)
 Frame = -3

Query: 439 PAPTDKSYKKWHRENLMVSSWLIHSMQPSINKGFMFLKSAKEIWDALKQTYSQEGNFAKL 260
           P+P D  +  W  E+ M+ SWL +S+ P +   +MFL +AK+IWDA++Q YS+  + A +
Sbjct: 54  PSPEDPKFTLWDEEDSMIMSWLWNSIMPEVCGPYMFLVTAKDIWDAVRQIYSKVKDAALI 113

Query: 259 YDLEQELLDIRQGDLSIIAYY 197
           Y+++ +L   +QG++ +I YY
Sbjct: 114 YEIKMKLSKTKQGNMMVIEYY 134



 Score = 60.5 bits (145), Expect(2) = 5e-24
 Identities = 26/56 (46%), Positives = 37/56 (66%)
 Frame = -2

Query: 191 LRSKWQEIDHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQ 24
           ++S W E+D+Y D+   C+ED   L +  ER RIF F+AGLN  F+  RVQIL ++
Sbjct: 137 MKSFWLELDYYQDFKMQCSEDAVILKNYVERERIFEFLAGLNIEFDQMRVQILGKE 192


>emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]
          Length = 1285

 Score = 91.7 bits (226), Expect(2) = 8e-24
 Identities = 42/88 (47%), Positives = 59/88 (67%)
 Frame = -3

Query: 460 LTGVLSKPAPTDKSYKKWHRENLMVSSWLIHSMQPSINKGFMFLKSAKEIWDALKQTYSQ 281
           L GV +KP  TD+ +K W+ EN MV SWLI+SM   I + F+   +AKEIWDA K+TYS 
Sbjct: 45  LNGVAAKPNKTDEKFKVWNAENNMVMSWLINSMTNDIGENFLLYGTAKEIWDAAKETYSN 104

Query: 280 EGNFAKLYDLEQELLDIRQGDLSIIAYY 197
             N  +L+++E  L D RQG+L++  Y+
Sbjct: 105 NENTLELFEVESVLHDFRQGELTVTQYF 132



 Score = 43.5 bits (101), Expect(2) = 8e-24
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = -2

Query: 191 LRSKWQEIDHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP 21
           L   WQ++D ++++N  C  D        ER RI++F+ GLN + +  R +IL  +P
Sbjct: 135 LNRYWQQLDLFEEHNWSCLGDGIKYKQIIERKRIYKFLIGLNKNLDEVRGRILGSKP 191


>emb|CBI20077.3| unnamed protein product [Vitis vinifera]
          Length = 1050

 Score = 85.9 bits (211), Expect(2) = 4e-23
 Identities = 36/88 (40%), Positives = 59/88 (67%)
 Frame = -3

Query: 460 LTGVLSKPAPTDKSYKKWHRENLMVSSWLIHSMQPSINKGFMFLKSAKEIWDALKQTYSQ 281
           L G    P P D  Y+ W  EN MV +WLI+SM+ +I + ++FL +AK++WD +++TYS 
Sbjct: 614 LIGANKAPKPEDHVYQTWDSENSMVMAWLINSMETAIGQTYLFLPTAKDLWDEVQETYSD 673

Query: 280 EGNFAKLYDLEQELLDIRQGDLSIIAYY 197
            GN  ++++++ +L DI+QG  S+  YY
Sbjct: 674 LGNATQMFEIKTKLKDIKQGSHSVTQYY 701



 Score = 47.0 bits (110), Expect(2) = 4e-23
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = -2

Query: 191 LRSKWQEIDHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP 21
           L + WQE+D + +    CAED A      E+ R F F+AGLN   +  R QIL ++P
Sbjct: 704 LPNAWQELDLFSNMEWKCAEDNAHYCKILEKERAFDFLAGLNKELDEVRGQILGKEP 760


>emb|CAN73014.1| hypothetical protein VITISV_007603 [Vitis vinifera]
          Length = 1121

 Score = 86.7 bits (213), Expect(2) = 4e-22
 Identities = 39/88 (44%), Positives = 56/88 (63%)
 Frame = -3

Query: 460 LTGVLSKPAPTDKSYKKWHRENLMVSSWLIHSMQPSINKGFMFLKSAKEIWDALKQTYSQ 281
           LTG  + P  T+  ++KW  EN M+ SWLI+SM   I + F+   +AK+IWDA K+TYS 
Sbjct: 215 LTGEAAMPKTTESGFRKWKIENSMIMSWLINSMNNDIGEIFLLFGTAKDIWDAAKETYSS 274

Query: 280 EGNFAKLYDLEQELLDIRQGDLSIIAYY 197
             N +KL+ +E  L D RQG+ ++  YY
Sbjct: 275 SENTSKLFQVESALHDFRQGEQTVTQYY 302



 Score = 42.7 bits (99), Expect(2) = 4e-22
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = -2

Query: 179 WQEIDHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP 21
           WQ +D ++ ++  C++D A+     E+ R+F+F  GLN   +  R +I++ +P
Sbjct: 309 WQHLDLFETHSWKCSDDAATYRKIVEQKRLFKFFLGLNRELDDVRGRIMDIKP 361


>emb|CAN82937.1| hypothetical protein VITISV_039222 [Vitis vinifera]
          Length = 1193

 Score = 87.0 bits (214), Expect(2) = 6e-22
 Identities = 39/91 (42%), Positives = 56/91 (61%)
 Frame = -3

Query: 460 LTGVLSKPAPTDKSYKKWHRENLMVSSWLIHSMQPSINKGFMFLKSAKEIWDALKQTYSQ 281
           LTG    P  T+  ++KW  EN M+ SWLI+SM   I + F+   +AK+IWDA K+TYS 
Sbjct: 243 LTGEAVMPETTEPGFRKWKIENSMIMSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSS 302

Query: 280 EGNFAKLYDLEQELLDIRQGDLSIIAYYKPY 188
             N ++L+ +E  L D RQG+ S+  YY  +
Sbjct: 303 SENTSELFQVESALHDFRQGEQSVTQYYNTF 333



 Score = 42.0 bits (97), Expect(2) = 6e-22
 Identities = 16/53 (30%), Positives = 32/53 (60%)
 Frame = -2

Query: 179 WQEIDHYDDYNPVCAEDVASLHSQTERSRIFRFIAGLNSHFEHARVQILERQP 21
           WQ++D ++ ++  C++D A+     E+ R+F+F  GLN   +  R +I+  +P
Sbjct: 337 WQQLDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRGRIMGIKP 389


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