BLASTX nr result

ID: Coptis25_contig00037696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037696
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514089.1| conserved hypothetical protein [Ricinus comm...   131   1e-28
ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...   130   3e-28
ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|2...   125   7e-27
emb|CBI35923.3| unnamed protein product [Vitis vinifera]              124   3e-26
ref|XP_003547490.1| PREDICTED: uncharacterized protein LOC100814...   120   4e-25

>ref|XP_002514089.1| conserved hypothetical protein [Ricinus communis]
           gi|223546545|gb|EEF48043.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 831

 Score =  131 bits (330), Expect = 1e-28
 Identities = 71/160 (44%), Positives = 97/160 (60%), Gaps = 8/160 (5%)
 Frame = +3

Query: 51  KNKTQPTMPQPTQEESPRPRKPT------TPVGRPPLPFKLNS--FYDENLNNGNQSPLL 206
           K K  P  P P    S  PR PT         GRPPLP ++N+  +Y+EN+N+G QSPL+
Sbjct: 355 KRKAPPPPPPPPPAPSTPPRAPTQRRNHTATTGRPPLPTRVNNNNWYEENVNSGGQSPLI 414

Query: 207 HIXXXXXXXXFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPT 386
            +        F++PG KF V+GDYV+++S+HSSR +SP+L+ V+          +T T  
Sbjct: 415 PMPPPPPPPPFRVPGFKFAVKGDYVKVRSAHSSRCSSPELEEVD--------RQSTDTVN 466

Query: 387 GEAGVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEK 506
              G SVFC SPDVN KAD+FIAR R   R+EK+NS+K +
Sbjct: 467 MMEGGSVFCLSPDVNLKADSFIARLRGEWRLEKINSLKNR 506


>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score =  130 bits (327), Expect = 3e-28
 Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
 Frame = +3

Query: 42  PNRKNKTQPTMPQPTQEESPRPRKPTTP----VGRPPLPFKLNSFY--DENLNNGNQSPL 203
           P R +K +  +P P     P P  P T      G+PPLP + +SFY  D+N+N+G QSPL
Sbjct: 387 PPRSSKRKTHIP-PAPPTPPPPPPPDTSRRRAAGKPPLPARKSSFYNRDDNVNSGGQSPL 445

Query: 204 LHIXXXXXXXXFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTP 383
             I        F+MP +K+VVRGD+VR++S+HSSR +SP+LD V+       S++ ++  
Sbjct: 446 --IPMPPPPPPFRMPELKYVVRGDFVRIRSTHSSRCSSPELDDVDL------SSNKSAMD 497

Query: 384 TGEAGVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEKE 509
            G+A  + FCPSPDVN KADTFIAR R   R+EK+NS++E++
Sbjct: 498 GGDAIGATFCPSPDVNVKADTFIARLRGEWRLEKINSLRERK 539


>ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|222855179|gb|EEE92726.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  125 bits (315), Expect = 7e-27
 Identities = 70/152 (46%), Positives = 98/152 (64%)
 Frame = +3

Query: 51  KNKTQPTMPQPTQEESPRPRKPTTPVGRPPLPFKLNSFYDENLNNGNQSPLLHIXXXXXX 230
           ++K+Q  +P P   E PR R+ +T  G+PPLP  +N+ Y +N+NNG QSPL+ +      
Sbjct: 388 RHKSQVPLPPP---EPPRRRRSST-TGQPPLPTGVNNLYVDNVNNGGQSPLVAMPPLPPP 443

Query: 231 XXFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGEAGVSVF 410
              +MPG +FV RGD V  +S+  SR +SPD + V+  +S  ++ + T    G  G S F
Sbjct: 444 PPCQMPGFQFVPRGDLVEKRSAQGSRCSSPDSEEVDKESS-RQTVNKTDGKDGIGGPS-F 501

Query: 411 CPSPDVNTKADTFIARFRAGLRMEKVNSMKEK 506
           CPSPDVN KADTFIAR R G R+EK+NS++EK
Sbjct: 502 CPSPDVNMKADTFIARLRDGWRLEKINSLREK 533


>emb|CBI35923.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  124 bits (310), Expect = 3e-26
 Identities = 68/132 (51%), Positives = 91/132 (68%), Gaps = 6/132 (4%)
 Frame = +3

Query: 132 RPPLPFKLNSF--YDENLNNGNQSPLLHIXXXXXXXX-FKMPGIKFVVRGDYVRLQSSHS 302
           +PP+P K +SF   D N   G++S L+ +         FKMP  KFVV GDYVR++S++S
Sbjct: 453 KPPIPEKSSSFNSVDGNPYAGSESLLIPVPPPPPPPPPFKMPDWKFVVHGDYVRIKSTNS 512

Query: 303 SRGNSPDLDSVETPTSIHESNSNT---STPTGEAGVSVFCPSPDVNTKADTFIARFRAGL 473
           SR  SPDLD + +P+S   S S +    T  G++   +FCPSPDVNTKADTFIARFRAGL
Sbjct: 513 SRSGSPDLDYIGSPSSKGPSRSTSLKSETEGGDSAQPLFCPSPDVNTKADTFIARFRAGL 572

Query: 474 RMEKVNSMKEKE 509
           ++EK+NS+KEK+
Sbjct: 573 KLEKINSIKEKQ 584


>ref|XP_003547490.1| PREDICTED: uncharacterized protein LOC100814577 [Glycine max]
          Length = 563

 Score =  120 bits (300), Expect = 4e-25
 Identities = 68/162 (41%), Positives = 94/162 (58%), Gaps = 10/162 (6%)
 Frame = +3

Query: 66  PTMPQPTQEESPRPRKPTTPV----GRPPLPFKLNSFYDENLNNGNQSPLLHIXXXXXXX 233
           P  P P++ +S  P  P  P     GRPPLP +  +F DE LN GNQSPL+ +       
Sbjct: 399 PPPPPPSKRKSQTPPPPEPPQRRNSGRPPLPNRTVTFNDETLNAGNQSPLIPVPPPPPP- 457

Query: 234 XFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNS------NTSTPTGEA 395
            FKM  +KFVVRGD+V+++S+ SSR +SP+ + +   +    +N       N +      
Sbjct: 458 -FKMKAMKFVVRGDFVKIRSNQSSRCSSPEREDIINASETTINNDAVTDAVNDTVNDSVM 516

Query: 396 GVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEKEGTAT 521
             +VFCPSPDVN KA TFIAR R   R+EK+NS+KEK+   +
Sbjct: 517 DPNVFCPSPDVNAKAATFIARLRGEWRLEKLNSLKEKDNNGS 558


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