BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037669
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   167   8e-40
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   163   2e-38
gb|ABA18097.1| pentatricopeptide repeat protein [Olimarabidopsis...   153   2e-35

>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/117 (67%), Positives = 92/117 (78%)
 Frame = +3

Query: 3   ALAFSRMSLFWDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDS 182
           ALAFSRMSL WDLH++LEHMKHEKV+PD+VTYGCIVDAYLDR+LG+NL+FA+ KM+ D S
Sbjct: 311 ALAFSRMSLLWDLHLTLEHMKHEKVSPDIVTYGCIVDAYLDRRLGKNLDFAIKKMNLDGS 370

Query: 183 PHVSTDPLVFEVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 353
           P + TDP VFEV GKGDFHSS+EA LE+K +RK T             R NQIFWNY
Sbjct: 371 PVLLTDPFVFEVLGKGDFHSSAEAFLEFKRQRKWTYRELVSIYLRKQYRSNQIFWNY 427


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/117 (68%), Positives = 89/117 (76%)
 Frame = +3

Query: 3   ALAFSRMSLFWDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDS 182
           ALAFSRMSL WDLH+ LEHMKH+KV PDLVTYGCIVDAYLDR+L RNL FAL+KM  D+S
Sbjct: 312 ALAFSRMSLLWDLHLGLEHMKHDKVAPDLVTYGCIVDAYLDRRLVRNLEFALSKMHVDNS 371

Query: 183 PHVSTDPLVFEVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 353
           P +STDP VFEVFGKGDFHSSSEA +E+K +RK T             R   IFWNY
Sbjct: 372 PVLSTDPFVFEVFGKGDFHSSSEAFMEFKRQRKWTYRELIKIYLRKQHRSKHIFWNY 428


>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/117 (69%), Positives = 88/117 (75%)
 Frame = +3

Query: 3   ALAFSRMSLFWDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDS 182
           ALAFSRMSLFWDLH+SLEHM+H KV  DLVTYGC+VDAYLDR+LG+NL+FAL KM+ DDS
Sbjct: 307 ALAFSRMSLFWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDS 366

Query: 183 PHVSTDPLVFEVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 353
           P VSTD  VFEV GKGDFHSSSEA LE K   K T             R NQIFWNY
Sbjct: 367 PLVSTDHFVFEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 423


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/117 (69%), Positives = 88/117 (75%)
 Frame = +3

Query: 3   ALAFSRMSLFWDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDS 182
           ALAFSRMSLFWDLH+SLEHM+H KV  DLVTYGC+VDAYLDR+LG+NL+FAL KM+ DDS
Sbjct: 330 ALAFSRMSLFWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDS 389

Query: 183 PHVSTDPLVFEVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 353
           P VSTD  VFEV GKGDFHSSSEA LE K   K T             R NQIFWNY
Sbjct: 390 PLVSTDHFVFEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 446


>gb|ABA18097.1| pentatricopeptide repeat protein [Olimarabidopsis pumila]
          Length = 424

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/117 (61%), Positives = 86/117 (73%)
 Frame = +3

Query: 3   ALAFSRMSLFWDLHVSLEHMKHEKVTPDLVTYGCIVDAYLDRKLGRNLNFALNKMSTDDS 182
           ALAFSRM+LFWDLH++LEHM+   + PDLVT+GC+VDAY+DR+L RNL F  N+M+ DDS
Sbjct: 308 ALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDRRLARNLEFVYNRMNLDDS 367

Query: 183 PHVSTDPLVFEVFGKGDFHSSSEALLEYKARRKSTXXXXXXXXXXXXXRCNQIFWNY 353
           P V TDPLVFEV GKGDFH SSEA+LE+  R K T             R +QIFWNY
Sbjct: 368 PVVLTDPLVFEVLGKGDFHLSSEAVLEFSPREKWTYRKLIGVYLKKKLRRDQIFWNY 424