BLASTX nr result

ID: Coptis25_contig00037630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037630
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877399.1| predicted protein [Arabidopsis lyrata subsp....    55   6e-06
ref|XP_003539732.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like ...    55   8e-06
ref|XP_003538048.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like ...    55   8e-06
ref|XP_002526365.1| sumo ligase, putative [Ricinus communis] gi|...    55   8e-06

>ref|XP_002877399.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323237|gb|EFH53658.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 873

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTC 353
           GVPIR  NRPG+QLLGANGRDDGP IT C
Sbjct: 250 GVPIRAINRPGSQLLGANGRDDGPIITPC 278


>ref|XP_003539732.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like [Glycine max]
          Length = 880

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTCT 356
           GVP+R TNRPG+QLLGANGRDDGP IT  T
Sbjct: 251 GVPVRATNRPGSQLLGANGRDDGPIITPYT 280


>ref|XP_003538048.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like [Glycine max]
          Length = 879

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTCT 356
           GVP+R TNRPG+QLLGANGRDDGP IT  T
Sbjct: 250 GVPVRATNRPGSQLLGANGRDDGPIITPYT 279


>ref|XP_002526365.1| sumo ligase, putative [Ricinus communis]
           gi|223534324|gb|EEF36036.1| sumo ligase, putative
           [Ricinus communis]
          Length = 876

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/30 (76%), Positives = 25/30 (83%)
 Frame = +3

Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTCT 356
           GVP+R  NRPG+QLLG NGRDDGP IT CT
Sbjct: 249 GVPVRAINRPGSQLLGINGRDDGPIITPCT 278


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