BLASTX nr result
ID: Coptis25_contig00037630
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037630 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002877399.1| predicted protein [Arabidopsis lyrata subsp.... 55 6e-06 ref|XP_003539732.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like ... 55 8e-06 ref|XP_003538048.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like ... 55 8e-06 ref|XP_002526365.1| sumo ligase, putative [Ricinus communis] gi|... 55 8e-06 >ref|XP_002877399.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297323237|gb|EFH53658.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 873 Score = 55.1 bits (131), Expect = 6e-06 Identities = 24/29 (82%), Positives = 25/29 (86%) Frame = +3 Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTC 353 GVPIR NRPG+QLLGANGRDDGP IT C Sbjct: 250 GVPIRAINRPGSQLLGANGRDDGPIITPC 278 >ref|XP_003539732.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like [Glycine max] Length = 880 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/30 (80%), Positives = 26/30 (86%) Frame = +3 Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTCT 356 GVP+R TNRPG+QLLGANGRDDGP IT T Sbjct: 251 GVPVRATNRPGSQLLGANGRDDGPIITPYT 280 >ref|XP_003538048.1| PREDICTED: E3 SUMO-protein ligase SIZ1-like [Glycine max] Length = 879 Score = 54.7 bits (130), Expect = 8e-06 Identities = 24/30 (80%), Positives = 26/30 (86%) Frame = +3 Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTCT 356 GVP+R TNRPG+QLLGANGRDDGP IT T Sbjct: 250 GVPVRATNRPGSQLLGANGRDDGPIITPYT 279 >ref|XP_002526365.1| sumo ligase, putative [Ricinus communis] gi|223534324|gb|EEF36036.1| sumo ligase, putative [Ricinus communis] Length = 876 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/30 (76%), Positives = 25/30 (83%) Frame = +3 Query: 267 GVPIRTTNRPGTQLLGANGRDDGPAITTCT 356 GVP+R NRPG+QLLG NGRDDGP IT CT Sbjct: 249 GVPVRAINRPGSQLLGINGRDDGPIITPCT 278