BLASTX nr result
ID: Coptis25_contig00037624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037624 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528591.1| ATP binding protein, putative [Ricinus commu... 92 3e-17 ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5... 80 2e-13 emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera] 80 2e-13 ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 gb|ABK95014.1| unknown [Populus trichocarpa] 71 8e-11 >ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis] gi|223531987|gb|EEF33799.1| ATP binding protein, putative [Ricinus communis] Length = 491 Score = 92.4 bits (228), Expect = 3e-17 Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 1/84 (1%) Frame = +1 Query: 1 VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNW-F 177 VGDE+K+GYFK+ +KK+ VG IG+GIL A+L+ GFG R+W RR V F Sbjct: 405 VGDESKVGYFKMWKGKKKKKEVGVGIGVGILSGAILILIGAIGFGVFRMWKRRRGVKGIF 464 Query: 178 VHDDGISPGPYRDLGSGSFRSVEL 249 ++G+SPGPY+DLGS SFRS+E+ Sbjct: 465 EEENGVSPGPYKDLGSASFRSIEM 488 >ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera] gi|297740069|emb|CBI30251.3| unnamed protein product [Vitis vinifera] Length = 485 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/83 (44%), Positives = 51/83 (61%) Frame = +1 Query: 1 VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNWFV 180 VGD+ K+GYFKVR +KK G+ IG+L VL F V GFG ++W R+ Sbjct: 402 VGDDTKVGYFKVREGPQKKAESGFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSE 461 Query: 181 HDDGISPGPYRDLGSGSFRSVEL 249 G++PGPY+ LG+ SFRS+E+ Sbjct: 462 EAGGVNPGPYKTLGAASFRSIEM 484 >emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera] Length = 490 Score = 79.7 bits (195), Expect = 2e-13 Identities = 37/83 (44%), Positives = 51/83 (61%) Frame = +1 Query: 1 VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNWFV 180 VGD+ K+GYFKVR +KK G+ IG+L VL F V GFG ++W R+ Sbjct: 402 VGDDTKVGYFKVREGPQKKAESGFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSE 461 Query: 181 HDDGISPGPYRDLGSGSFRSVEL 249 G++PGPY+ LG+ SFRS+E+ Sbjct: 462 EAGGVNPGPYKTLGAASFRSIEM 484 >ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1| predicted protein [Populus trichocarpa] Length = 487 Score = 71.2 bits (173), Expect = 8e-11 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 3/86 (3%) Frame = +1 Query: 1 VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVA-GFGALRIWNRRTRVNWF 177 VGDE+K+GYFKVRT ++ H +GI +L +++ V G+G +IWNRR R Sbjct: 403 VGDESKVGYFKVRT--KRSWHKKMKVGIRVLGAVIVVLTGVVLGYGGYKIWNRRRRGPKR 460 Query: 178 VHDDG--ISPGPYRDLGSGSFRSVEL 249 V ++ +SPGPY++LGS SF+S+E+ Sbjct: 461 VLEEKTEVSPGPYKNLGSASFKSIEM 486 >gb|ABK95014.1| unknown [Populus trichocarpa] Length = 487 Score = 71.2 bits (173), Expect = 8e-11 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 3/86 (3%) Frame = +1 Query: 1 VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVA-GFGALRIWNRRTRVNWF 177 VGDE+K+GYFKVRT ++ H +GI +L +++ V G+G +IWNRR R Sbjct: 403 VGDESKVGYFKVRT--KRSWHKKIKVGIRVLGAVIVVLTGVVLGYGGYKIWNRRRRGPKR 460 Query: 178 VHDDG--ISPGPYRDLGSGSFRSVEL 249 V ++ +SPGPY++LGS SF+S+E+ Sbjct: 461 VLEEKTEVSPGPYKNLGSASFKSIEM 486