BLASTX nr result

ID: Coptis25_contig00037624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037624
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528591.1| ATP binding protein, putative [Ricinus commu...    92   3e-17
ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...    80   2e-13
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]    80   2e-13
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
gb|ABK95014.1| unknown [Populus trichocarpa]                           71   8e-11

>ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis]
           gi|223531987|gb|EEF33799.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 491

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNW-F 177
           VGDE+K+GYFK+    +KK+ VG  IG+GIL  A+L+     GFG  R+W RR  V   F
Sbjct: 405 VGDESKVGYFKMWKGKKKKKEVGVGIGVGILSGAILILIGAIGFGVFRMWKRRRGVKGIF 464

Query: 178 VHDDGISPGPYRDLGSGSFRSVEL 249
             ++G+SPGPY+DLGS SFRS+E+
Sbjct: 465 EEENGVSPGPYKDLGSASFRSIEM 488


>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/83 (44%), Positives = 51/83 (61%)
 Frame = +1

Query: 1   VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNWFV 180
           VGD+ K+GYFKVR   +KK   G+   IG+L   VL F  V GFG  ++W R+       
Sbjct: 402 VGDDTKVGYFKVREGPQKKAESGFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSE 461

Query: 181 HDDGISPGPYRDLGSGSFRSVEL 249
              G++PGPY+ LG+ SFRS+E+
Sbjct: 462 EAGGVNPGPYKTLGAASFRSIEM 484


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/83 (44%), Positives = 51/83 (61%)
 Frame = +1

Query: 1   VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVAGFGALRIWNRRTRVNWFV 180
           VGD+ K+GYFKVR   +KK   G+   IG+L   VL F  V GFG  ++W R+       
Sbjct: 402 VGDDTKVGYFKVREGPQKKAESGFGFVIGLLGATVLAFGGVVGFGVYKVWRRKGAKGVSE 461

Query: 181 HDDGISPGPYRDLGSGSFRSVEL 249
              G++PGPY+ LG+ SFRS+E+
Sbjct: 462 EAGGVNPGPYKTLGAASFRSIEM 484


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1   VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVA-GFGALRIWNRRTRVNWF 177
           VGDE+K+GYFKVRT  ++  H    +GI +L   +++   V  G+G  +IWNRR R    
Sbjct: 403 VGDESKVGYFKVRT--KRSWHKKMKVGIRVLGAVIVVLTGVVLGYGGYKIWNRRRRGPKR 460

Query: 178 VHDDG--ISPGPYRDLGSGSFRSVEL 249
           V ++   +SPGPY++LGS SF+S+E+
Sbjct: 461 VLEEKTEVSPGPYKNLGSASFKSIEM 486


>gb|ABK95014.1| unknown [Populus trichocarpa]
          Length = 487

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1   VGDENKIGYFKVRTVVEKKRHVGYVIGIGILVCAVLMFFAVA-GFGALRIWNRRTRVNWF 177
           VGDE+K+GYFKVRT  ++  H    +GI +L   +++   V  G+G  +IWNRR R    
Sbjct: 403 VGDESKVGYFKVRT--KRSWHKKIKVGIRVLGAVIVVLTGVVLGYGGYKIWNRRRRGPKR 460

Query: 178 VHDDG--ISPGPYRDLGSGSFRSVEL 249
           V ++   +SPGPY++LGS SF+S+E+
Sbjct: 461 VLEEKTEVSPGPYKNLGSASFKSIEM 486


Top