BLASTX nr result

ID: Coptis25_contig00037620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037620
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189486.1| leucine-rich repeat protein kinase-like protein...   102   2e-20
ref|NP_174039.1| putative inactive receptor kinase [Arabidopsis ...   100   9e-20
ref|XP_002890616.1| hypothetical protein ARALYDRAFT_889992 [Arab...   100   9e-20
ref|XP_002875454.1| hypothetical protein ARALYDRAFT_484619 [Arab...   100   9e-20
ref|XP_002883614.1| hypothetical protein ARALYDRAFT_480045 [Arab...   100   2e-19

>ref|NP_189486.1| leucine-rich repeat protein kinase-like protein [Arabidopsis
           thaliana] gi|9294580|dbj|BAB02861.1| receptor-like
           protein kinase-like protein [Arabidopsis thaliana]
           gi|26449808|dbj|BAC42027.1| putative receptor kinase
           [Arabidopsis thaliana] gi|224589583|gb|ACN59325.1|
           leucine-rich repeat receptor-like protein kinase
           [Arabidopsis thaliana] gi|332643925|gb|AEE77446.1|
           leucine-rich repeat protein kinase-like protein
           [Arabidopsis thaliana]
          Length = 605

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
 Frame = +1

Query: 136 LCSLLHGIF--SVVNSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCW 309
           LC ++   F  SV+ + EDDIRCL+G K SL DPQN L SWNF NTT G +C + GV+CW
Sbjct: 14  LCFIIFLCFCSSVMAADEDDIRCLRGLKASLTDPQNALKSWNFDNTTLGFLCNFVGVSCW 73

Query: 310 SENEDRLIGIELLSMELGGEIPDSLQFC 393
           +  E+R+I +EL  M L G+IPDSLQ+C
Sbjct: 74  NNQENRVINLELRDMGLSGKIPDSLQYC 101


>ref|NP_174039.1| putative inactive receptor kinase [Arabidopsis thaliana]
           gi|75097079|sp|O04567.1|Y1719_ARATH RecName:
           Full=Probable inactive receptor kinase At1g27190; Flags:
           Precursor gi|8778873|gb|AAF79872.1|AC000348_25 T7N9.25
           [Arabidopsis thaliana] gi|53828509|gb|AAU94364.1|
           At1g27190 [Arabidopsis thaliana]
           gi|224589400|gb|ACN59234.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332192671|gb|AEE30792.1| putative inactive receptor
           kinase [Arabidopsis thaliana]
          Length = 601

 Score =  100 bits (250), Expect = 9e-20
 Identities = 42/74 (56%), Positives = 60/74 (81%)
 Frame = +1

Query: 172 NSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLS 351
           +S EDD+ CLQG KNSL DP +RL+SW+F N++A ++CK  GV+CW+E E+R+I ++L S
Sbjct: 22  SSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQS 81

Query: 352 MELGGEIPDSLQFC 393
           M+L GEIP+SL+ C
Sbjct: 82  MQLAGEIPESLKLC 95


>ref|XP_002890616.1| hypothetical protein ARALYDRAFT_889992 [Arabidopsis lyrata subsp.
           lyrata] gi|297336458|gb|EFH66875.1| hypothetical protein
           ARALYDRAFT_889992 [Arabidopsis lyrata subsp. lyrata]
          Length = 601

 Score =  100 bits (250), Expect = 9e-20
 Identities = 42/74 (56%), Positives = 60/74 (81%)
 Frame = +1

Query: 172 NSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLS 351
           +S EDD+ CLQG KNSL DP +RL+SW+F N++A ++CK  GV+CW+E E+R+I ++L S
Sbjct: 22  SSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQS 81

Query: 352 MELGGEIPDSLQFC 393
           M+L GEIP+SL+ C
Sbjct: 82  MQLAGEIPESLKLC 95


>ref|XP_002875454.1| hypothetical protein ARALYDRAFT_484619 [Arabidopsis lyrata subsp.
           lyrata] gi|297321292|gb|EFH51713.1| hypothetical protein
           ARALYDRAFT_484619 [Arabidopsis lyrata subsp. lyrata]
          Length = 579

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = +1

Query: 181 EDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLSMEL 360
           EDDIRCL+G K SL DPQN L SWNF NTT G +C + GV+CW+  E+R+I +EL  M L
Sbjct: 5   EDDIRCLRGLKTSLTDPQNALKSWNFDNTTLGFLCNFVGVSCWNNQENRVINLELRDMGL 64

Query: 361 GGEIPDSLQFC 393
            G+IPDSLQ+C
Sbjct: 65  SGKIPDSLQYC 75


>ref|XP_002883614.1| hypothetical protein ARALYDRAFT_480045 [Arabidopsis lyrata subsp.
           lyrata] gi|297329454|gb|EFH59873.1| hypothetical protein
           ARALYDRAFT_480045 [Arabidopsis lyrata subsp. lyrata]
          Length = 616

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/74 (56%), Positives = 60/74 (81%)
 Frame = +1

Query: 172 NSIEDDIRCLQGFKNSLKDPQNRLASWNFINTTAGAVCKYDGVTCWSENEDRLIGIELLS 351
           +S EDD+ CLQG KNSL DP +RL+SW+F N++A ++CK  GV+CW+E E+R+I ++L S
Sbjct: 22  SSAEDDVLCLQGLKNSLIDPLSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQS 81

Query: 352 MELGGEIPDSLQFC 393
           M+L GEIP+SL+ C
Sbjct: 82  MQLAGEIPESLKLC 95


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