BLASTX nr result
ID: Coptis25_contig00037602
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037602 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19246.3| unnamed protein product [Vitis vinifera] 67 1e-09 emb|CAN78350.1| hypothetical protein VITISV_022837 [Vitis vinifera] 67 1e-09 ref|NP_194189.6| Rho GTPase activation protein (RhoGAP) with PH ... 64 1e-08 ref|XP_002867658.1| predicted protein [Arabidopsis lyrata subsp.... 64 1e-08 ref|XP_002301088.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 >emb|CBI19246.3| unnamed protein product [Vitis vinifera] Length = 900 Score = 67.0 bits (162), Expect = 1e-09 Identities = 32/46 (69%), Positives = 40/46 (86%) Frame = +1 Query: 1 KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADS 138 KSG++ EG+ +T+SALSKLTTRLNFLKERRTQI NE+QN++ G S Sbjct: 783 KSGTRNEGSNSTTSALSKLTTRLNFLKERRTQIANEIQNMDKGRSS 828 >emb|CAN78350.1| hypothetical protein VITISV_022837 [Vitis vinifera] Length = 276 Score = 67.0 bits (162), Expect = 1e-09 Identities = 32/46 (69%), Positives = 40/46 (86%) Frame = +1 Query: 1 KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADS 138 KSG++ EG+ +T+SALSKLTTRLNFLKERRTQI NE+QN++ G S Sbjct: 159 KSGTRNEGSNSTTSALSKLTTRLNFLKERRTQIANEIQNMDKGRSS 204 >ref|NP_194189.6| Rho GTPase activation protein (RhoGAP) with PH domain [Arabidopsis thaliana] gi|332659528|gb|AEE84928.1| Rho GTPase activation protein (RhoGAP) with PH domain [Arabidopsis thaliana] Length = 933 Score = 63.9 bits (154), Expect = 1e-08 Identities = 30/43 (69%), Positives = 37/43 (86%) Frame = +1 Query: 1 KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESG 129 +SG+K EG+ T+SALSKLT RLNFLKERR+QI NELQN++ G Sbjct: 821 RSGTKGEGSTTTTSALSKLTMRLNFLKERRSQIANELQNMDKG 863 >ref|XP_002867658.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313494|gb|EFH43917.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 925 Score = 63.9 bits (154), Expect = 1e-08 Identities = 30/43 (69%), Positives = 37/43 (86%) Frame = +1 Query: 1 KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESG 129 +SG+K EG+ T+SALSKLT RLNFLKERR+QI NELQN++ G Sbjct: 812 RSGTKGEGSTTTTSALSKLTMRLNFLKERRSQIANELQNMDKG 854 >ref|XP_002301088.1| predicted protein [Populus trichocarpa] gi|222842814|gb|EEE80361.1| predicted protein [Populus trichocarpa] Length = 904 Score = 63.2 bits (152), Expect = 2e-08 Identities = 30/48 (62%), Positives = 41/48 (85%) Frame = +1 Query: 1 KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADSCL 144 +SG+++EG +T+SAL++LTTRLNFLKERR+QI NELQN++ G S L Sbjct: 766 RSGARSEGMNSTTSALTRLTTRLNFLKERRSQIANELQNMDKGRGSDL 813