BLASTX nr result

ID: Coptis25_contig00037602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037602
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19246.3| unnamed protein product [Vitis vinifera]               67   1e-09
emb|CAN78350.1| hypothetical protein VITISV_022837 [Vitis vinifera]    67   1e-09
ref|NP_194189.6| Rho GTPase activation protein (RhoGAP) with PH ...    64   1e-08
ref|XP_002867658.1| predicted protein [Arabidopsis lyrata subsp....    64   1e-08
ref|XP_002301088.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CBI19246.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +1

Query: 1   KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADS 138
           KSG++ EG+ +T+SALSKLTTRLNFLKERRTQI NE+QN++ G  S
Sbjct: 783 KSGTRNEGSNSTTSALSKLTTRLNFLKERRTQIANEIQNMDKGRSS 828


>emb|CAN78350.1| hypothetical protein VITISV_022837 [Vitis vinifera]
          Length = 276

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +1

Query: 1   KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADS 138
           KSG++ EG+ +T+SALSKLTTRLNFLKERRTQI NE+QN++ G  S
Sbjct: 159 KSGTRNEGSNSTTSALSKLTTRLNFLKERRTQIANEIQNMDKGRSS 204


>ref|NP_194189.6| Rho GTPase activation protein (RhoGAP) with PH domain [Arabidopsis
           thaliana] gi|332659528|gb|AEE84928.1| Rho GTPase
           activation protein (RhoGAP) with PH domain [Arabidopsis
           thaliana]
          Length = 933

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESG 129
           +SG+K EG+  T+SALSKLT RLNFLKERR+QI NELQN++ G
Sbjct: 821 RSGTKGEGSTTTTSALSKLTMRLNFLKERRSQIANELQNMDKG 863


>ref|XP_002867658.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313494|gb|EFH43917.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 925

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESG 129
           +SG+K EG+  T+SALSKLT RLNFLKERR+QI NELQN++ G
Sbjct: 812 RSGTKGEGSTTTTSALSKLTMRLNFLKERRSQIANELQNMDKG 854


>ref|XP_002301088.1| predicted protein [Populus trichocarpa] gi|222842814|gb|EEE80361.1|
           predicted protein [Populus trichocarpa]
          Length = 904

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 41/48 (85%)
 Frame = +1

Query: 1   KSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADSCL 144
           +SG+++EG  +T+SAL++LTTRLNFLKERR+QI NELQN++ G  S L
Sbjct: 766 RSGARSEGMNSTTSALTRLTTRLNFLKERRSQIANELQNMDKGRGSDL 813


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